Clupea harengus (Atlantic herring): 116220977
Help
Entry
116220977 CDS
T09045
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
116220977
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116220977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
DUF4201
zf-RING_6
U-box
Syntaxin-6_N
OmpH
CCDC-167
Motif
Other DBs
NCBI-GeneID:
116220977
NCBI-ProteinID:
XP_031425769
UniProt:
A0A6P8FIM8
LinkDB
All DBs
Position
7:complement(28377312..28379144)
Genome browser
AA seq
284 aa
AA seq
DB search
MAEAAPSNHELCTCPICLDLLRHPVTIPCGHNYCMGCITSCWDREDQKGVYSCPQCRQTF
TPRPVLNKNNIVAELVEQIKKTRIQAAAPVPCTAGPGDVECDVCTGTKLKAVKSCLECLV
SYCETHYKVHNDIHPGRKHKVVDATGQLQERICTQHEKPLEIFCRTDLSCVCLLCLVDEH
KSHDTVSASAGRREKQTHLGETQSKIQQRIQEREKELQDLRKAVETLKVSTDQRRGGQQL
AAGGAISGSIRALLQSARQESVMLSHFPAPLSLTVGTRLCGGAE
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcggctccaagtaaccacgaactttgtacatgtccgatttgtttggatctt
cttaggcatccagtgactattccttgtggacacaattactgtatgggctgcattacgagc
tgctgggatcgggaagatcagaagggagtctacagctgcccccagtgcagacagacgttc
accccaagacccgttttaaacaaaaataatattgttgctgaacttgtggaacagatcaag
aagaccagaatccaagctgctgctcctgttccatgtactgctggacctggagatgtggag
tgtgacgtctgcactgggacaaaactcaaagctgttaagtcctgtctggaatgtctggtg
tcatactgtgaaactcactacaaagttcacaatgacatacaccctgggcgaaaacataag
gtggttgatgccacaggccagctacaggagaggatctgcacccaacatgagaagcctctg
gagatattttgtcgtacggatctaagttgtgtttgtttgctctgtctggtggatgaacac
aaaagccatgacactgtgtcagcctctgcagggaggagagagaaacagacacacttgggg
gagacccagagtaaaatccagcagagaatccaggagagagagaaggagctgcaggacctg
aggaaggctgtggagactctcaaggtgagtactgaccagaggagaggaggacaacagctg
gctgctggaggagccatttcaggctcaatcagggctctcctccagtcagccagacaggag
tctgtaatgctgagccacttcccagctcctctgagcctcactgtgggtaccaggctgtgt
ggaggagctgagtga
DBGET
integrated database retrieval system
