Clupea harengus (Atlantic herring): 116221157
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Entry
116221157 CDS
T09045
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
116221157
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116221157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
zf-RING_5
Fib_alpha
zf-ANAPC11
zf-RING_10
U-box
Y1_Tnp
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
116221157
NCBI-ProteinID:
XP_031426903
UniProt:
A0A6P8FEP2
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Position
7:complement(28502914..28509545)
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AA seq
550 aa
AA seq
DB search
MAEAAPNNHELFTCSICLDLLRDPVTTNCGHSYCMGCITSCWDQEDQKGVYSCPQCRQTF
TPRPVLSKNNIFAELVEQIKKTRIQAAAPFPCNAGPGDVECDVCTGTKLKAVKSCLECLV
SYCETHYKVHNDIIPGRKHKVVDATGQLQERICKQHEKPLEIFCRTDLSCVCLLCLVDEH
KGHDTVSASAGRREKQTHLGETQSKIQQRIQEREKELQELRKALETLKSSAQTAVDDSER
IFTEMIRSIERRRSEVKELIRAQEKAEVSRAEGLLKRLEQEIAELKRRDAELEQLSHTED
HIHFLKTFQSVSEAPESKDLSCIYVNQGLSFEAVKKSVSSLKMQLENFCKEEVMKISASV
TEVQAILPPEPTTREDFLQYSCHFTLDPNTAQRNLHLSEGDRRVEKRDEVQSYPDHPERF
DSQPQVLCREGVSGRCYWEVEWSGDVYISVSYKSISRRGGSECVFGYNEQSWCLGLYSVG
SYFIHNNKETKLPLVASSRIGVYVDHRAGTLAFYSISDTMTLLHRVQTTFTHTLYPGLRC
LSSGSSVKLL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcggctccaaataaccacgaactttttacatgttcgatttgtttggatctt
cttagggatccagtgactactaattgtggacacagttactgtatgggctgcattacgagc
tgctgggatcaggaagatcagaagggagtctacagctgcccccagtgcagacagacgttc
accccaagacccgttttaagcaaaaataatatttttgctgagctggtggaacagatcaag
aagaccagaatccaagctgctgctccttttccatgtaatgccggacctggagatgtggag
tgtgacgtatgcactgggacaaaactcaaagcggtgaagtcctgtctggaatgtctggtg
tcatactgtgaaactcactacaaagttcacaatgacattatccctgggcgaaaacacaag
gtggttgatgccacaggccagctacaggagaggatctgcaaacaacatgagaagcctctg
gagatattttgtcgtacggatctaagttgtgtttgtttgctctgtctggtggatgaacac
aaaggccatgacactgtgtcagcctctgcagggaggagagagaaacagacacacttgggg
gagacccagagtaaaatccagcagagaatccaggagagagagaaggagctgcaggagctg
aggaaggcgttggagactctcaagagctctgcacagacagcagtggatgacagtgagagg
atctttactgagatgatccgctccattgagagaaggcgctctgaggtgaaagagctgatc
agagctcaggagaaggctgaggtgagtcgggctgaaggactcctgaagcgactggagcag
gagattgctgagctgaagaggagagatgctgagctggagcagctttcacacacagaggat
cacatccatttcctcaagactttccagtcagtcagtgaggcacctgagtctaaagactta
tcctgcatctatgtgaaccaaggcctctcttttgaggctgtgaagaaatctgtctcctca
ctaaagatgcagctggagaatttctgcaaggaggaagtcatgaagatatctgcatcagtg
actgaagtccaggctattttgcctcctgaacctacaaccagagaggatttcctacaatac
tcctgtcacttcacactggatccaaacacagcacagagaaacctccatctgtctgagggg
gacaggagggtggagaagagagatgaggtccagtcatatccggatcatccagagagattt
gatagtcagcctcaggtgctgtgtagagagggtgtgtctggacgctgctactgggaggtt
gagtggagtggggatgtttatatatcagtctcatataaaagcatcagcaggagaggaggt
agtgagtgtgtgtttggatataatgagcagtcctggtgtctgggcctctacagcgtgggc
tcctatttcattcacaataataaagagactaaactccctctagtggccagctccagaata
ggagtgtatgtggatcacagggcaggaactctggccttctacagcatctctgacacaatg
accctcctgcacagagtccagaccacattcactcacacactctaccctgggttaaggtgt
ttgagttctggatcatcagtgaagctgctgtga
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