Clupea harengus (Atlantic herring): 116221186
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Entry
116221186 CDS
T09045
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
116221186
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116221186
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-Nse
U-box
zf-RING_6
Mt_ATP-synt_D
Fib_alpha
Dermcidin
Motif
Other DBs
NCBI-GeneID:
116221186
NCBI-ProteinID:
XP_031426986
UniProt:
A0A6P8FU53
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Position
7:complement(30693776..30699588)
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AA seq
553 aa
AA seq
DB search
MAEAAPNNYELCTCPICLDLFRDPVTTNCGHTYCKGCITSCWDREDQKGVYSCPQCRQTF
TPRPVLNKNNIVAELVEQIKKTRIQVAAPVACTAGPGNVECDVCTGTKLKAVKSCLDCLL
SYCETHFKVHNDVNPGRKHSVIDATGQLQERICSHHEKVFEIFCRTDQSCICYLCTMYEH
KGHDTVSAAAERTDKQRQLGQTQRRFQQRIQEREKELQKLRKAVKTLKSSAQTAVDDSER
IFTEMIRSIERRRSEVKELIRDQEKAEVSQAEGLLKRLEQEIAELKRRDAELEQLSHTED
DIHFLKTFQSVSETPESKDLSCISVRQGLSFEAVKKSVSSLKTQLENFCKEEVMKISASV
TEVQAVLPLEPTTREDFLQYSCHFTLDPNTAFRHLHLSEGNRRVEKRDELQSYPDHPERF
DGWEQVLCREGVSGRCYWEVEWSGEWWVYISVSYKSISRKGGGEKCVFGWNDQSWSLFLS
SSSSSFWHNNKDTDLPLVASSRIGVYVDHRAGTLAFYSISDTMTLLHRVKTTFTHTLHPG
FRLNCVGASVKLL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcggctccaaataactacgaactttgtacatgtccgatttgtttggatctt
tttagggatccagtgactactaattgtggacacacttactgtaaaggctgcattacgagc
tgctgggatcgggaagatcagaagggagtctacagctgcccccagtgcagacagacgttc
accccaagacccgttttaaacaaaaataatattgttgctgaacttgtggaacagatcaag
aagaccagaatccaagttgctgctcctgttgcatgtactgctgggcctggaaatgtggag
tgtgacgtctgcactgggacaaaactcaaagctgtgaagtcctgtctggattgtctgttg
tcttactgtgaaactcacttcaaagttcacaatgatgtcaaccccggaagaaaacactca
gttattgatgccacaggccagctacaggagaggatctgctcccatcatgagaaggttttt
gaaatattttgtcgaaccgatcagagttgtatctgctatctgtgcacgatgtacgaacat
aaaggccatgacacagtctcagctgcagcagaacggacagacaaacagaggcagttgggg
cagacccagaggagattccagcagagaatccaggagagagagaaggagctgcagaagctg
aggaaggctgtgaagactctcaagagctctgcacagacagcagtggatgacagtgagagg
atcttcactgagatgatccgctccattgagagaaggcgctctgaggtgaaagagctgatc
agagatcaggagaaggctgaggtgagtcaggctgaaggactcctgaagcgactggagcag
gagattgctgagctgaagaggagagatgctgagctggagcagctttcacacacagaggat
gacatccatttcctcaagactttccagtcagtcagtgagacacctgagtctaaagactta
tcctgcatctctgtgaggcaaggcctctcttttgaggctgtgaagaaatctgtctcctca
ctaaagacacagctggagaatttctgcaaggaagaagtcatgaagatatctgcatcagtg
actgaagtccaggctgttttgcctcttgaacctacaaccagagaggatttcctacaatac
tcctgtcacttcacactggacccaaacacagcattcagacacctccatctgtctgagggg
aacaggagggtggagaagagagatgagctccagtcatatcctgatcatccagagagattt
gatgggtgggagcaggtgctgtgtagagagggtgtgtctggacgctgctactgggaggtt
gagtggagtggggagtggtgggtttatatatcagtctcatataaaagcatcagcaggaaa
ggaggaggtgaaaagtgtgtgtttggatggaatgatcagtcctggagtctgttcctctcc
agcagcagctcctctttctggcacaataataaagacactgatctccctctagtggccagc
tccagaataggagtgtatgtggatcacagggcaggaactctggccttctacagcatctct
gacacaatgaccctcctgcacagagtcaagaccacattcactcacacactccaccctggg
tttaggcttaattgtgttggcgcatcagtgaagctgttgtga
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