Clupea harengus (Atlantic herring): 116225163
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Entry
116225163 CDS
T09045
Name
(RefSeq) DENN domain-containing protein 5A-like
KO
K20164
DENN domain-containing protein 5
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
116225163
Membrane trafficking [BR:
char04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
116225163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
RUN
dDENN
PLAT
Motif
Other DBs
NCBI-GeneID:
116225163
NCBI-ProteinID:
XP_031442864
Ensembl:
ENSCHAG00000011223
UniProt:
A0A6P8GUM6
LinkDB
All DBs
Position
20:22831607..22850495
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AA seq
1170 aa
AA seq
DB search
MTTGFSSSSVRFADYFVICGLDTESGLEPDELSALCEYIKASRHRDGARGESLGADEGEN
FEQSPLRRTFKSKVLAHYPENVEWNPFDQDAVGMLCMPKGLFFRTQQEVCEPQFHTFIIT
REDGSRSYGFALTFFEEVRSAQICSAMQTLYHMHNAAQYHITQQAPPPATPPAPPERPGP
SRLLQRFNSYDITRDTLYVSKCICLLAPLAFQSACQKVLEQLHRAATSPQPPPLPLESYV
YNVLYEVPLPPAGRSLRFSGIYAPVVCQRPSTAELPLFDFPLAEVFLLLGADNVLQLFTC
ALLEIQILLYSQHYQRLMTVAESITALMFPFQWQHVYVPILPASLMHFLDAPVPYLMGLQ
SNGSQDRSKLELPQEANLCFVDIDNHFIELPEDLPQFPQRGEFLRELTEALQRFNLPPEG
SATPHPHRPRPRCHDDKRNGNVGVAALDSALLRENATIARLQALVKKTGISLEKVQVDSK
EEVCDSKDARLQCNAEEWWTQRMNIQVREVFANRFAQMFADYEVFVIQPSQDKEAWFSNR
DQMQNFDKASFLSDQPEPSLPFLSRFLETQTFASFIDSKILHHDDEEHAHTLRLFDMRVD
RVRMLNVRTPTLRSELYQRATHIEDAERAIEARLRKIDHTALHPHLLDMKIGQGRYQPGF
FPRLQADVLSSGPSSNKWAKRSAPAQWRRRDRQKQHAEHLYLDNDQREKYIQEARNLGTT
IRQPKLSNLSPSVIAQTNWKFVEGLLKECRTKTKRMLVEKMGREAVELGHGEGSITGVEE
NTLIASLCDLLERIWSHGLQVKQGKSALWSHLLHYQESKEKKDTPSSLGPPGFIQEQGRR
KSDVGCILPVLRVSLIQDMRHVQNMCEIKTEVGRARAWVRLSMEKKLLSTHLKMLLSDHE
LTKKLYKRYAFLRCDDEKEQFLYHLLSFNAVDYFCFTNVFTTIMIPYHVWVSSGKKLGGS
MFTANPWVCVSGELAETGVLQLPKNTLEITFECQNLGRLTTVQMGHDNSGLYAKWLVESV
MVRNEITGHTYRFPCGRWLGKGVDDGSLERILVGELLSIETEERLSRTPPMQPSPGMMRR
LVAISPNSKPKLNTGQIQEGVGEAINGIVKHFHKPEKERGSLTLLLCGEYGLVWALEQVF
LHSFKSPRLFKNIFIWDFLGNTRISVCPAN
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccggcttcagctccagttccgtccgcttcgcagattacttcgtgatttgcgga
ctcgacacagaaagcggtctggaaccagacgagctctctgctctatgcgagtatataaag
gcctctagacacagagatggtgccagaggagagagcttgggtgcagatgaaggggagaac
tttgagcagagtcccctgaggagaacctttaagtcgaaggttctggcccactaccctgag
aatgtggagtggaaccccttcgaccaggatgctgttggcatgctctgcatgccgaagggc
ttgttcttccgcacgcagcaggaggtctgtgaaccgcagttccacacctttatcatcacg
cgtgaggacggctcgcgctcctacggcttcgccctgaccttcttcgaggaggttcgctcg
gcgcagatctgcagcgccatgcagacgctctaccacatgcacaacgccgcgcagtaccac
atcacccagcaggccccgcccccggccacgcccccggccccgcccgagcgccccggcccc
tcccgcctgctgcagcgcttcaactcctacgacatcacgcgcgacacgctctacgtctcc
aagtgcatctgtctgctggcgccgctggccttccagtccgcctgtcagaaggttctggaa
cagctgcaccgcgccgccacctccccgcagcccccgcccctgcccctggagagctacgtc
tacaacgtgctgtacgaggtgccgctgccccctgctggccgctcgctgcgcttcagcggc
atctacgcgcctgtggtgtgccagaggcccagcactgcggagctgccgctcttcgacttc
cccctggccgaagtcttcctcctgctgggcgccgacaacgtgctgcagctcttcacctgc
gccctgctcgagattcagatcctgctctactcccagcactaccagcggctgatgacggtg
gcagagagcatcacggcgctcatgttccccttccagtggcagcacgtgtacgtgcccatc
ctccccgcctccctcatgcacttcctggacgcccccgtcccctacctcatgggcctgcag
tccaacggctcacaggaccgctcgaaactagagctaccgcaggaggctaacctgtgcttc
gtggacattgataatcacttcattgagctgccggaggacctacctcagttccctcagcgg
ggggagtttctgcgggagctgactgaggcgctgcaacgcttcaacctgccaccggagggc
agcgccacgccacacccgcacaggccacgcccacgctgccacgatgacaagcgcaatggc
aatgtgggcgtggctgctctggactccgccctgctgcgagagaatgccaccatcgcacgt
ctgcaggcgcttgtcaagaagaccggcatcagtctggagaaggtgcaggtggacagtaaa
gaggaggtgtgtgacagtaaggacgcgaggctgcagtgtaacgctgaggagtggtggacg
cagcgtatgaacatccaggtgcgcgaggtcttcgccaaccgcttcgcccagatgttcgct
gactacgaggtctttgtcatccagcccagccaggacaaggaggcctggttctccaaccga
gaccagatgcagaactttgacaaggcatccttcctgtcggaccagccggagccatccctc
cccttcctgtctcgtttcctggagacgcagacgttcgcctccttcatcgactccaagatc
cttcaccatgacgacgaggaacacgcacacaccctgcgcttgtttgacatgcgcgtggac
agggtccgcatgctgaacgtgcgcacgccgacgctgcgctccgagctctaccagagagcc
acacacatcgaggacgcagagagagccattgaggctcgtctgaggaagatagaccacaca
gcgctgcaccctcacctgctggacatgaagatcggccaggggcgctaccagcccggcttc
ttcccacgcctacaggcagacgtgctgtccagcggccccagcagcaacaaatgggcaaag
cgaagtgctcctgctcaatggaggaggcgtgaccgtcagaagcagcatgcggagcatctc
tacctggacaatgaccagcgagagaagtacattcaggaagccagaaacctgggcaccacc
attcgccagcccaaactgtccaacctgtcgccgtcggtgatcgcccagaccaactggaag
ttcgtggagggtctgctgaaggaatgcaggactaagaccaaacgtatgctggtggagaag
atgggccgtgaggcggtggagttgggtcacggggaaggcagcatcaccggtgtggaggag
aacaccctcatcgccagcctgtgtgatctactggagaggatatggagccatggactacag
gtcaaacagggaaaatctgccctctggtctcacctgcttcattatcaggagagtaaagag
aagaaggacactcctagcagcctgggccctcctggtttcattcaggagcaggggaggcgt
aagtctgacgttggttgcatcctccccgtcctcagagtctctctcattcaagacatgagg
catgtccagaacatgtgtgagattaagaccgaggtgggcagagcgagggcgtgggttcgt
ctcagcatggagaagaagctgctctccactcacctgaagatgctgctgtccgaccacgag
ctcaccaagaagctgtataagcgctatgcgtttctgcgctgtgacgatgagaaggagcag
ttcctttaccacctgctgtccttcaatgctgtggactacttctgtttcaccaacgtcttc
acaaccatcatgattccgtaccacgtgtgggtgagttccggtaagaagctgggcggctcc
atgttcactgccaacccctgggtgtgtgtgtcaggggagctcgctgagacgggcgtcctg
cagctgcccaagaacacactggagatcacgtttgagtgccagaacctgggccgtctcacc
actgttcaaatgggtcatgacaactcaggtctctacgccaaatggctggtggagagcgtg
atggtacgaaacgagatcactggacacacctacaggtttccctgtggtcgctggctgggt
aagggggttgatgatggcagtttggagcgtatcctggtgggggagctgttgagcatcgag
actgaggagcgcctgagtcgcacaccaccgatgcagccttcaccaggaatgatgcgccgt
ctagtggccatctcgcctaatagcaagccgaaactgaatacaggtcaaatccaggaggga
gttggggaggctatcaatggaatagtgaagcatttccacaagccggagaaagagaggggt
agtctgactctgttgctgtgtggtgagtatggactggtctgggctctggaacaggtgttt
ctgcacagcttcaagtccccacgactcttcaagaacatcttcatctgggacttcttaggt
aacactcgtatttctgtgtgtccagccaattga
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