Clupea harengus (Atlantic herring): 122128515
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Entry
122128515 CDS
T09045
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
122128515
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122128515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
Fib_alpha
zf-RING_6
Y1_Tnp
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
122128515
NCBI-ProteinID:
XP_042564279
UniProt:
A0A8M1KRI0
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Position
7:complement(28419123..28425862)
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AA seq
554 aa
AA seq
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MAEAAPSNQDIFTCPVCLDILNYPVTILCGHTYCMGCITSCWDRENLKGVYSCPQCRQTF
TPRPVLNKNSIVAELVEQIKKTRIQAAAPVPCTAGPGDVECDVCTGRKLKAVKSCLECLV
SYCETHYKAHNELNPGRKHKVIDATGQLQERICTQHEKPLEIFCRTDLSCVCLLCLVDEH
KGHDTVSASAGRREKQTHLGETQNKIQQRIQEREKELQELRKAVETLKSSAQTAVEDSER
IFTEMIRSIERRRSEVKKLIRAQEKAEVSQAERLLKRLEQEIAELKRRDAELEQLSHTED
HIHFLKTFQSVSETPESKDLSCISVNQGLSFEAVKKSVSSLKTQLENFCKEEVMKISASV
TEVQAILPPEPTTREDFLQYSCHFTLDPNTAHRRLHLSEGNRRVKLRAEVQSYPDHPERF
DGWSQVLCREGVSGRCYWEVEWSGEWGVMISVSYKSISRRGGGIERFGCNDQSWSLNLSS
SGSYFSHNRKETKLPLVASSRIGVYVDHRAGTLAFYSLSDTMTLLHRVQTTFNHTLYPGF
GFVSIYAGASVKLL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcggctccaagtaaccaggacatttttacatgcccggtttgccttgatatt
ctgaattatccggtaactattctctgtggacatacttactgtatgggctgcattacgagc
tgctgggatcgggaaaatctgaagggtgtctacagctgcccccagtgcagacagacgttc
accccaagacccgttttaaacaaaaatagtattgttgctgaacttgtggaacagatcaag
aagaccaggatccaagctgctgctcctgttccatgtactgctggacctggagatgtggag
tgtgacgtctgcactgggagaaaactcaaagctgtgaagtcctgtctggaatgtctggtg
tcatactgtgaaactcactacaaagctcacaatgaacttaatcctgggcgaaaacacaag
gtgatcgatgccacaggccagctacaggagaggatctgcacccaacatgagaagcctctg
gagatattttgtcgtacggatctaagttgtgtttgtttgctctgtctggtggatgaacac
aaaggccatgacactgtgtcagcctctgcagggaggagagagaaacagacacacttgggg
gagacccagaataaaatccagcagagaattcaggagagagagaaggagctgcaggagctg
aggaaggctgtggagactctcaagagctctgcacagacagcagtggaggacagtgagagg
atctttactgagatgatccgctccattgagagaaggcgctctgaggtgaaaaagctgatc
agagctcaggagaaggctgaggtgagtcaggccgaaagactcctgaagcgactggagcag
gagattgctgagttgaagaggagagatgctgagctggagcagctttcacacacagaggat
cacatccatttcctcaagactttccagtcagtcagtgagacacctgagtctaaagactta
tcctgcatctctgtgaaccaaggcctctcttttgaggctgtgaagaaatctgtctcctca
ctaaagacgcagctggagaatttctgcaaggaggaagtcatgaagatatctgcatcagtg
actgaagtccaggctattttgcctcctgaaccaacaaccagagaggatttcctacaatac
tcctgtcacttcacactggatccaaacacagcacacagacgcctccatctgtctgagggg
aacaggagggtgaagctgagagctgaggtccagtcatatcctgatcatccagagagattt
gatgggtggagtcaggtgctgtgtagagagggtgtgtctggacgctgctactgggaggtt
gagtggagtggggagtggggggttatgatatcagtctcatataaaagcatcagcaggaga
ggagggggtattgagaggtttggatgtaatgatcagtcctggagtctgaacctctccagc
tctggctcctatttcagtcacaatcgtaaagagactaaactccctctagtggccagctcc
agaataggagtgtatgtggatcacagggcaggaactctggccttctacagcctctctgac
acaatgaccctcctgcacagagtccagaccacattcaatcacacactctaccctgggttt
gggtttgtttcaatttatgctggagcatcagtgaagctgttgtga
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