Clupea harengus (Atlantic herring): 122130272
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Entry
122130272 CDS
T09045
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122130272 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
char03009
]
122130272 (nvl)
Ribosome biogenesis [BR:
char03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
122130272 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
RuvB_N
AAA_16
AAA_2
AAA_22
AAA_5
AAA_14
AAA_33
TIP49
Mg_chelatase
Zeta_toxin
AAA_28
RNA_helicase
nSTAND3
ATPase
AAA_17
AAA_18
NACHT
Vps4_C
AAA_3
Rad17
IstB_IS21
Viral_helicase1
TsaE
Sigma54_activ_2
DUF815
Motif
Other DBs
NCBI-GeneID:
122130272
NCBI-ProteinID:
XP_042560881
UniProt:
A0A8M1KA02
LinkDB
All DBs
Position
Unknown
AA seq
894 aa
AA seq
DB search
MGIDYKLKKRVEKYLKSKKTEYVDLTSLATDLQQLYRFDYGRRNRTAFRIQVEKVYDVIS
KESDITTLEDKHLAKRARPSQEEDGDGSSLTDDTTDSEEDIPEHEHTNHMNNSLLSLYRK
GNPDENGTPTKSQSHSPAPTSGIDQPTGGASGTSAPPSSGTLVSGGGWFIDKRQRVEPNI
LIDLCDDEPRSPSVNKQTDVSMLETEKKKKGKLKRSKRKKQEESQENDADIEAQILAKKA
NTKAPVLQHSTVKFEDVGGNEETLTEVCKLLIHMRHPEVYQQLGVVPPRGFLLHGPPGCG
KTLLAQAVAGEVELPMLKVSAPELVSGVSGESEQKLRELFELAVASAPCILFIDEIDSIT
PKREVASKDMERRIVAQLLTCMDDLNSLTIPAQVLVIGATNRPDSLDPALRRAGRFDREI
CLGIPDEGARLRILKTLCRKLKLPEDFDYKKLARLTPGYVGADLMALCREAAMSAVNRVL
LELQEKAEEGSAANPADMPASQTPDAQRQTGDPVNQVWDDPTTSTAEGQDQDQTSQCQPM
ETQLPTTTAVHEQQGELQQLLRLLKRCESLSDEQLEGLCILMSDFQASLASVQPSAKREG
FATVPDVTWDDVGALLDIREELTMAILAPVRNPEQFKALGLSAPAGVLLAGPPGCGKTLL
AKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRS
GHESGASVRVVNQLLTEMDGLESRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPP
KDRHAILLTITKGGTKPRLQADVNLEEIALNARCDCFTGADLSALVREASVNALRAHLYS
RPASAHTGHSFSAGPVEDIRVSQQNFEDAFKKVRPSVSKKDQVMYEKLKVSLSS
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcgactacaagctgaaaaagagagttgagaagtacctgaaatccaagaagact
gagtatgtggaccttacctcattggctaccgatcttcagcaactatatagattcgactac
ggacggagaaatagaacagcctttagaatacaagtggaaaaagtctatgatgtgataagt
aaagagtctgacatcacaacattggaggacaaacatttggccaaacgggccagaccaagt
caggaggaggatggggatggtagcagtttaacagatgacactactgacagtgaagaggac
attcctgagcatgagcacaccaatcacatgaacaactctctcttgtcgctgtaccggaaa
gggaaccccgatgagaatggaacacccaccaaaagccagtcacacagcccagcgccgact
tcaggaatagaccagcccacagggggtgccagtggcacgtctgcccctccaagttcgggc
actctggtgtcgggtggaggctggtttattgacaagaggcagcgtgttgaaccaaacatt
ttgattgacttgtgtgatgatgagcctaggagcccatccgtgaacaaacaaacagatgtt
tcgatgctggagacagagaagaagaaaaagggcaaattaaagagatcaaaaagaaaaaag
caagaagaatctcaagaaaatgatgcagatatagaggcacaaatattggcaaaaaaagca
aataccaaagccccggtgcttcagcactcaaccgtcaaatttgaggatgttggtggtaat
gaggaaacgttgacggaagtgtgtaagctgctcatccacatgcgtcatcctgaagtttac
cagcagctcggggtggttcccccacgaggcttcctcctccatgggcctccgggctgtggg
aagaccctgctggcacaagctgtagcaggggaggtggagctgccgatgctgaaggtgtct
gccccggagctggtgtctggggtctcaggggagtccgagcagaagctgagggagctgttt
gagctggctgtggcaagtgccccttgcatcctgttcattgatgaaattgattcaatcacg
cctaagagagaggtggcctccaaagacatggagaggaggattgtagcacagctgttgacc
tgcatggacgacttgaactctttgaccattcctgcccaggttctggtgatcggcgctacg
aatcgtccagactctctggacccagccctccgtcgggcgggccgctttgaccgagagatc
tgtctgggcatcccagacgagggtgctcgtctcaggattctaaagacactttgccgtaag
ctgaagctgcctgaggactttgactacaagaagttggcgcgcctcacccccgggtatgtg
ggcgccgacctgatggcgctgtgccgagaggctgccatgagtgccgtcaaccgtgtcctc
ctggagctacaggagaaggcagaggagggaagtgctgccaatccagccgacatgccagcc
tcacaaactcctgatgcccagcggcagactggagacccagtgaaccaggtgtgggacgat
ccaaccaccagcactgcagagggtcaggatcaggatcagactagccagtgccaaccaatg
gagactcagctgccaacaaccactgctgtacatgaacagcagggggagcttcagcaactt
cttcggctgctgaagaggtgcgagtccctgtcagatgagcagttggagggtctgtgcatc
ctcatgtcggacttccaggcctctctagctagcgtccagccttctgccaagcgtgagggc
tttgccaccgtgcctgatgttacgtgggatgacgtcggcgccctgctggacatccgagag
gagctgaccatggccatcctggctcctgtccgcaacccggaacagttcaaagcgctgggt
cttagtgcccctgcaggggtgttgctggctgggcctcctgggtgtgggaagacccttttg
gcaaaagcagttgccaatgagtctggcctcaatttcatctcagtcaaaggtcccgagttg
ctgaatatgtatgttggtgaaagtgagcgggccgtgcgacaagtgttccagaggggtcgt
aactcagccccctgtgtgatcttcttcgatgagatagacgcactttgtccacgccggtct
ggacatgagtccggagccagtgtgcgtgtggtcaaccagctgctcactgagatggacgga
ctggagtctcgccggcaggtcttcattatggctgcaaccaacagaccagatatcattgat
ccggctgtgctgagacctggccgcctggataagaccttgtacgtgggtctcccgcccccg
aaggaccgacatgccatcctgctcaccatcaccaagggtggcaccaagcctcggctgcag
gcagatgtgaatcttgaagagattgcgctgaacgcacgttgtgactgcttcacgggggca
gatctgtccgctctggtgagggaggcttcagtgaacgccctgagagctcacctgtattcc
cgcccggcctccgcccacacaggccacagcttttccgctggtccagttgaagacatccgc
gtcagtcagcagaactttgaggatgcctttaaaaaagtgcgtccatcggtgtcaaagaag
gaccaggtcatgtatgaaaaattgaaagtatctctaagcagttga
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