Clupea harengus (Atlantic herring): 122132553
Help
Entry
122132553 CDS
T09045
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
122132553
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122132553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-Nse
zf-RING_6
MAP65_ASE1
zf-RING_10
U-box
CASP_C
GrpE
Dermcidin
DUF4239
Exonuc_VII_L
Fib_alpha
Y1_Tnp
LMBR1
Motif
Other DBs
NCBI-GeneID:
122132553
NCBI-ProteinID:
XP_042563165
UniProt:
A0A8M1KKR4
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MAEAISSDNELFTCPICLDLLRDPVTTNCGHSYCKGCIKGCWDQEDQKGVYSCPQCRQTF
APRPVLNKNNIVAELVEKIRKTRIQAAAPVSCPAGPGDVECDVCTGRKLKAVKSCLDCLL
SYCETHFKVHNDVNPGRKHSVIDATGQLQERICSHHKKVFEIFCRTDQSCICYLCTMDEH
KAHDTVTAAAERTHKQRQLGQTQRRFQQRIQEREKELQKLRKAVKTLKSSAQTAVEDSER
IFTEMIRSIERRCSEVKELIRDQEKAEVSRAEDLLKRLEQEIAELKRRDAELEQLSHTED
HIHFLKNVLSIRDSPHSSPSMTFNQSFSFEAVKESVSGVKVQLDDIFRQEVVKISAAVTN
IQIIQSLELSEVQAVFPEPVTREEFSQYSCHFTLDPNTAHRKLHLSEGNRRVERRDEVQS
YPDHPERFDEWGQVLCREGVSGRCYWEVERSGELVMISVSYKSISRRGWGNECVFGCNDQ
SWSLILLSSSSSFRHNNKDTNLPLVASSRIGVYVDHRAGTLAFYSISDTMTLLHRVQTTF
THTLYPGFGLYPGTVKLL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcgatttcaagcgacaatgagctttttacatgtccgatttgtttggatctt
cttagggatccagtgactactaattgtggacacagttactgtaaaggctgcattaagggc
tgctgggatcaggaagatcagaagggagtctacagctgcccccagtgcagacagacgttc
gccccaagacccgttttaaacaaaaataatattgttgctgaacttgtggaaaagatcagg
aagaccagaatccaagctgctgctcctgtttcatgtcctgctggacctggagatgtggag
tgtgacgtctgcactgggagaaaactcaaagctgtgaagtcctgtctggattgtctgttg
tcttactgtgaaactcacttcaaagttcacaatgatgtcaaccccggaagaaaacactca
gtgattgatgccacaggccagctacaggagaggatctgctctcatcataagaaggttttt
gaaatattttgtcgaaccgatcagagttgtatctgctatctgtgcacgatggacgaacat
aaagcccatgacacagtcactgctgcagcagaacggacacacaaacagaggcagttgggg
cagacccagaggagattccagcagagaatccaggagagagagaaggagctgcagaagctg
aggaaggctgtgaagactctcaagagctctgcacagacagcagtggaggacagtgagagg
atcttcactgagatgatccgctccattgagagaaggtgctctgaggtgaaagagctgatc
agagatcaggagaaggctgaggtgagtcgggctgaagacctcctgaagcgactggagcag
gagattgctgagctgaagaggagagatgctgagctggagcagctttcacacacagaggat
cacatccatttcctcaagaatgtcctgtcaatcagagactctcctcactcctcgcccagc
atgaccttcaaccaaagcttctcttttgaggctgtgaaggaatctgtctctggagtgaag
gtgcagctggatgacatcttcaggcaggaagtagtcaagatatctgcagcagtaacgaat
atccagatcatccagtccttagaattgtctgaagtccaggctgtttttcctgaaccagtg
accagagaggagttctcacagtactcctgtcacttcacactggatccaaacacagcacac
agaaagctccatctgtctgaggggaacaggagggtggagaggagagatgaggtccagtca
tatcctgatcatccagagagatttgatgagtggggtcaggtgctgtgtagagagggtgtg
tctggacgctgctactgggaggttgagaggagtggggagctggttatgatatcagtctcc
tataaaagcatcagcaggagaggatggggtaatgagtgtgtgtttggatgtaatgatcag
tcctggagtctgatcctcctcagcagcagctcctctttcagacacaataataaagacact
aatctccctctagtggccagctccagaataggagtgtatgtggatcacagggcaggaact
ctggccttctacagcatctctgacacaatgaccctcctgcacagagtccagaccacattc
actcacacactctaccctgggtttgggctatatcctggaacagtgaagctgttgtga
DBGET
integrated database retrieval system
