Cohnella herbarum: HH215_12545
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Entry
HH215_12545 CDS
T08421
Name
(GenBank) GGDEF domain-containing protein
Organism
cheb
Cohnella herbarum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
CBS
Motif
Other DBs
NCBI-ProteinID:
QJD83929
UniProt:
A0A7Z2ZLI3
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All DBs
Position
complement(2805968..2808265)
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AA seq
765 aa
AA seq
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MNETNGWLDQNILRRWTNKDGLPHHCGLFIVRYYGGQESGPERKDNPSPRLANILRAIAL
RVSKIEEQVRGWTLSETGFVLAVSFMEDGANEREISAGRLAFLIRDTAQRVLLDFRCPEA
KQAGVIRCGFGWAFGGADATSERPPTHAGDWENALLGAYEAAWQKMFFSPVPMIRFPLAE
AYETLTGLEFEVRYSPIVSLSDGSLYGYEAVPVDPAKGTRIDPQAIYAQADQTGKLFEWD
RRFRETAIRGLPSRNGDVKLFLPVPAKIIFDPRLYPGSTLRRIEAANLRPEHVVLVIIGG
DNESAAMTESALKHYRNQGFHIALSGIEPGLESLRRMADMHPDYALMHIGWMSGSATDPV
EESLLQALVGVARKERIVFIACGPDLEKHLPGLVAGGMNYAQVNWLRDGSGEKTAKLLSA
LKERIQAEVNKKFLGATGTMSELINPVKQFDRDTPVSEVSRHFELHREAQGIVIADGSGK
PVGLVMKEKLLQLLSGQFGLPLYWNRAVGKIMDTHPMVVEDSITVDQASQMAMAREPDKL
YDAVIITREGIVTGITSIRSMLEWISQSRMTAAQWANPLSGLPGNEPIRRELIRRLADGR
PFAVLYADLDYFKWYNDQYGFQRGDEVIRFTGETLIEVVSAQLNCECFVGHIGGDDFIVI
SSGSDSVELANEVIRRFEEGIGTYTGKHKGPVLDRGGHPVEASGLSLSLSLLLCQSTGGW
TPESLSERAALLKKKAKQLRGNTLVWEAIADNVENRRKSADLTAH
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagaccaacggatggttagaccagaatatcttgcgacgctggacgaacaaagat
gggcttccgcatcattgcggtttgtttatcgtccggtactacggcggacaagaatcgggg
ccggaaaggaaagacaatccctctccgcgcttagcgaacattcttcgcgcgatagctttg
cgggtatcgaagatcgaggagcaggtgcgagggtggacgttgtccgagaccggcttcgta
ttggccgtctctttcatggaagacggggcgaacgaacgcgaaatcagcgccggcagattg
gccttcctgattcgcgatacggcccagcgcgtattgttggatttccggtgtcccgaggcg
aagcaagcgggcgttatccggtgcggattcggttgggcgttcggaggggccgacgcaacg
tccgagcggccgccgacgcacgctggggactgggagaacgcactcctcggcgcttacgaa
gccgcatggcaaaagatgtttttttcacccgtgccgatgattcgttttccgcttgcggaa
gcctacgagactttgaccggacttgagttcgaggtccgttattccccgatcgtctcgctg
tcggacggttccttatacggatacgaggcggttcccgtcgatcccgcgaagggaacgcgg
attgatccgcaagccatctacgcgcaagcggaccaaacgggcaagttgttcgaatgggat
cgccgcttccgcgagacggctattcgcggcttgccttcccgcaacggcgacgtcaagctg
ttccttccggtgccggccaaaatcattttcgacccgaggctttaccccggaagcacgctt
agaagaatcgaggcggcgaatttgcggcccgagcatgtcgttctcgtcattatcggaggg
gataacgaatcggcggcaatgacggaatcggccttgaaacattaccgcaatcaagggttt
cacatcgcgctttccgggatcgaacccgggcttgaatctttgcggcggatggcggacatg
catccggattatgccctgatgcacatcggctggatgagcggttcggcgacggacccggtg
gaagagagtttgctgcaagcgttggtcggcgtggcccgcaaggagcggatcgtctttatc
gcatgcggtcccgacctggagaagcaccttccaggtctagtggccggtggaatgaactac
gcgcaagtgaattggctaagggacggatccggcgagaagacggcgaaacttctgtctgcg
cttaaggagcgaattcaggctgaagtgaacaagaagttcctcggcgcaacgggcacgatg
tcggagttaatcaatccggtgaagcaattcgatcgggatacgcccgtgtcggaagtatcc
aggcatttcgaactgcatcgggaagcgcaaggcatcgttatcgccgacgggagcggcaaa
ccggtcggactggtcatgaaagagaagcttctgcagcttctgtccggtcagttcggtctg
ccgctctattggaatcgcgcggtcgggaaaatcatggatacccacccgatggtcgtggag
gattccataacggttgaccaagcttcgcaaatggcgatggcccgcgagccggataagcta
tacgacgcggtaatcattacccgggaaggaatcgttaccggaattacatcgattcgttcc
atgctggaatggatttcgcaatctagaatgacagccgcgcaatgggcgaatccgctttcc
ggattgccgggtaacgagcccattcgacgcgagcttatccgtcgattggcggacgggcgg
ccgtttgccgtgctctatgcggatttggattattttaagtggtacaacgatcaatatggc
ttccaaagaggcgacgaagtgatccggttcacgggagaaaccttaatcgaggtcgttagc
gcgcaattgaattgcgagtgtttcgtcggacatatcggcggggatgattttatcgtgatt
tcaagcggttcggattccgtcgagctggcaaacgaagttattcggaggttcgaggaggga
atcgggacgtacacgggaaaacacaagggacccgttctcgacaggggaggacatcccgta
gaggcctcagggctgtcgctttctttgtccttgttgttatgccaatccacgggaggttgg
accccggaatctttgtcggagagagcggctttgcttaagaaaaaggctaaacagctccga
ggaaacacgctcgtatgggaagcaatagcggataatgtcgaaaatcggcgtaaatccgcg
gatttaaccgctcattaa
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