Cohnella herbarum: HH215_30355
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Entry
HH215_30355 CDS
T08421
Name
(GenBank) extracellular solute-binding protein
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
cheb
Cohnella herbarum
Pathway
cheb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cheb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HH215_30355
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cheb02000
]
HH215_30355
Transporters [BR:
cheb02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
HH215_30355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3502
SBP_bac_1
Ribosomal_60s
Motif
Other DBs
NCBI-ProteinID:
QJD87056
UniProt:
A0A7Z2VPD8
LinkDB
All DBs
Position
7230039..7231631
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AA seq
530 aa
AA seq
DB search
MSRRQAKLPIILSVILLLSIVLAACSGKNNNAEPSKESASSAVSPSASASAPQSEAASEE
PPKEEEEVTLKFYFGGDKKAATDEVWDKVSEYVKAKGLNVKFNINFIPFGDFKDKMLVMA
ASGDKWDLNFDGDWLSYKQMAAKDSYMALNDLLPKYAPNLNKKYEEQGTLEAATVNGKIV
GLPWTMKMNQRFFVGWRADLAEKAGITREPDSVKTVEDVDALLHELKAAYPNEKLSRTTA
QEMYQTRDEWVDLAFHKLGFYLNDPEIKIQAMEQQPFYKEAAHMTKKWYNDKILNRDAMI
DKEDGASQWRNGKTLFTMTSHEWAFADPGFSDPSFKHQMSFLYPDKKFVNRTALANVLAI
NRNSEHPDRVLRFLDMMETDQVLYDLVQYGIEGKTYVLNGDVAEYPEGMQFTTSNYMEWG
GQWAFWKPQYMRPNQTYPKDFWLKEAEFASIPVNVNSPIDGLFIAEDNIKNEIAKRDQAY
EEFGKPIEFGVVKDVDASITDYIEKQKSNGLDKIIEEAQKQVDAYLASKK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaagacaagccaagctgcctattatcctatctgtcattttacttctgagtatc
gtactggcggcgtgcagcggtaagaacaacaacgcggaaccgagcaaggagtccgcaagc
agcgcggtatccccgtctgcttccgcatccgcgcctcaatcggaagcggcatcggaagaa
cctccgaaagaggaggaagaggtaacgctcaaattctacttcggaggcgacaagaaggcg
gccacggacgaagtgtgggacaaggttagcgaatatgtcaaggccaaagggctgaacgtc
aagttcaacatcaactttatcccgttcggcgatttcaaggataagatgctcgtaatggcc
gcttccggagacaagtgggatttgaacttcgacggagattggttgtcctataagcaaatg
gcggcgaaagattcctatatggccctaaacgatttgcttccgaaatacgctccgaacctg
aacaagaagtatgaagagcaaggaacgctggaagcggctacggtaaacggtaaaatcgtg
ggacttccttggacgatgaaaatgaaccagcggtttttcgtgggctggcgcgccgatttg
gcggagaaagcgggcatcacgcgcgagccggattcggtcaagacggtcgaagatgtcgat
gctttgttgcacgagttgaaggcggcttacccgaacgagaaattgtctcgcacgacggcg
caggagatgtatcaaacccgcgacgagtgggtagatctggctttccataagctcgggttt
tacttgaacgatccggaaatcaaaatccaagcgatggaacagcagcctttctacaaggaa
gctgcacatatgaccaagaaatggtataacgacaaaatcctcaaccgcgacgcgatgatc
gataaggaagacggagccagccaatggagaaacggcaagacgttgttcacgatgacgtcg
catgagtgggcgttcgcggacccgggcttctcggatccttcgtttaagcatcaaatgtcc
ttcctctatccggacaaaaaatttgttaaccggacggcgctcgcgaacgtgctcgccatt
aaccgcaactcggagcatcccgaccgcgtcttgcggttcctggatatgatggagacggat
caggtgctgtacgatctcgtgcaatacggaatcgaaggcaaaacttacgtgctgaatggc
gatgtcgcggaatatccggaaggcatgcaatttacgacgagcaactatatggaatggggc
ggccagtgggcattctggaaaccgcaatacatgcgtccgaaccagacgtatccgaaggat
ttctggttgaaggaagccgagttcgccagcataccggtgaacgtcaattcgccgatcgac
ggtctgtttatcgcggaagacaatatcaagaacgaaatcgccaaacgcgatcaagcctac
gaggaattcggcaagccgatcgaattcggagtcgtcaaggacgtggacgcttccattacg
gattatatcgagaagcagaagagcaacggtctcgacaaaatcatcgaggaagcgcagaag
caagtcgacgcttacttggccagcaaaaaataa
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