Chitinophaga pendula: KTO58_14010
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Entry
KTO58_14010 CDS
T08407
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chf
Chitinophaga pendula
Pathway
chf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KTO58_14010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chf03021
]
KTO58_14010
Transcription machinery [BR:
chf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KTO58_14010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
Phage_CP76
Sigma70_ECF
HTH_40
HTH_11
HTH_29
HTH_10
HTH_38
HTH_5
HTH_23
GntR
HTH_20
HTH_DeoR
HTH_24
bact_SelB_WH_2nd
TetR_C_26
HrcA_DNA-bdg
Motif
Other DBs
NCBI-ProteinID:
UCJ04819
LinkDB
All DBs
Position
complement(4044142..4044720)
Genome browser
AA seq
192 aa
AA seq
DB search
MKYSQLDSDALLLNVRSGNAAAFSELYGRFWEPFYLFVYRRLRNEDDAKDVVQNVFVNIW
LRREQMMVNNAAEPYLYTMLRNEMLKGISRSIKDRSRQQEMETLLQPELEQLLTPMQKEI
IFNHIDGLVNDLPDRMQQVYRLSHEEQLGVREIASRLELSEQTVRNHLNAALKKLRFGLK
EALLLILLADLV
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaagtattcgcaattagacagtgatgcgctcctgctcaatgttcgttccgggaacgcc
gccgccttcagcgagctgtatggccgcttttgggagcctttttatcttttcgtttatcgc
cgccttagaaatgaagacgacgccaaagacgtggtgcagaacgtatttgtgaacatctgg
ctccgacgggaacaaatgatggtaaacaacgctgcagaaccttatctctataccatgctc
cgcaatgaaatgctaaaagggatatcccgtagtattaaggaccgtagccgtcaacaggaa
atggaaacactattacaaccagaactggagcaattgttaacccccatgcaaaaagagatc
atttttaaccatatcgatggccttgtgaatgacttgccagatcgtatgcagcaagtatac
cggcttagtcatgaggaacaacttggcgtcagggagatcgcttccaggttggaactgtct
gaacaaaccgtacgaaaccacctcaacgccgccttgaaaaagttgcgcttcgggctgaaa
gaagcattattacttatcctcttagccgatttggtctga
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