Chitinophaga pendula: KTO58_14060
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Entry
KTO58_14060 CDS
T08407
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chf
Chitinophaga pendula
Pathway
chf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KTO58_14060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chf03021
]
KTO58_14060
Transcription machinery [BR:
chf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KTO58_14060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_11
HTH_23
HTH_DeoR
HTH_24
HTH_7
HTH_10
HTH_29
HTH_17
HTH_38
HTH_AsnC-type
UPF0122
HTH_28
CFAP300
HrcA_DNA-bdg
DUF3316
Sigma70_r3
DUF2089
HTH_40
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
UCJ04829
LinkDB
All DBs
Position
complement(4057082..4057693)
Genome browser
AA seq
203 aa
AA seq
DB search
MLGSDSKTGNGEPNRQQSRPHFDEIYELYWKELYEVAYRRLPMAADAEDMLQDLFLSLLK
NPSVIAKEGSIRAYLHKALKGRVIDFYRKSLLKETFESYSALSAAGHTNHPDTYLMHKEL
ETLLEKEIGGMPERMQTVFLMSRKGMLSNEEIAHELNISHQTVRNQISAAIKRIRKALYQ
YNLAHDAGTRMILAVTAVLLTPR
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgctcggatcagatagcaaaacaggcaatggcgaaccaaacagacagcaaagccgccct
cattttgatgaaatctacgaactgtactggaaagaattatatgaagtagcctatcgacgc
ctaccaatggcggcagatgccgaagacatgctgcaagacctgttcttgtcgctgcttaaa
aacccttccgtgatagcaaaagaagggtctatccgcgcttatttacataaagcccttaaa
gggagagtgatcgatttttacagaaaaagcctgttgaaagaaacttttgaaagctattcc
gccctctctgctgcgggtcatactaatcatcccgatacctatctgatgcataaagagctg
gagacactattggaaaaggaaatcggtggtatgccagaacgtatgcaaaccgttttcctg
atgagcagaaaaggaatgctatccaatgaggaaatcgcccatgaactcaatatctcacat
caaaccgtacgcaatcagatcagcgcagccatcaaaaggatacggaaagcactttatcag
tataatctagctcatgacgctggtacacgtatgatcctggctgtcaccgcggtactgtta
accccgcgctga
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