Colletotrichum higginsianum: CH63R_00528
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Entry
CH63R_00528 CDS
T08176
Name
(RefSeq) DEAD/DEAH box helicase
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CH63R_00528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
chig03041
]
CH63R_00528
Enzymes [BR:
chig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CH63R_00528
Spliceosome [BR:
chig03041
]
Complex A
U2 snRNP components
U2 related factors
CH63R_00528
Complex B
CH63R_00528
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
28859610
NCBI-ProteinID:
XP_018163865
UniProt:
A0A1B7YTW9
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All DBs
Position
1:1725625..1729415
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AA seq
1224 aa
AA seq
DB search
MARTRDSRSPSPAGSQHNARRPRKDDDRRDRDRRDDGGREYRRRSRSRSPADVRSHRHGR
RDGEHSDKYHEQRRFRDRDRDRDSFRRRDRSVDRRDDSYRGGRRDNDRNRDRRRSRDRYA
DRDRSLDRRRPRDGDRDHRPRMDDSRDRAHARREGTADSRPRSRRDDSRPRGAALSENAS
APVNEATKPKPAPAQTEADKKAERLARLEAWKKSRETKANKENEVNPSQTRNLLAEMDRK
SVPSPAPASPSVASPAVASPGAASPAPTQTTASGAASPAPFAGKFDPKAIAKKSAASHKS
SGTNGVLGSLQGRPEKSIAPVAPITKGLPVPSPAGGFYANKSTTASALPANRNVSAFGFS
KATADSEKLANKRKLDLDEEEGTKRKLTKLPALPLEADDTPYADQDEDDESDGGNFAETE
EEAAAAARAAHERRERELQEQEPQEEAKPDVDMQDAALPQINDTAEEPAAEQMDVEEEDD
VDPLDAFMADLSDAKAKPTGHKASTSSKKAQEPEAYFSDDEYAFKTEDGKDPNAVLAMAA
KRKKKDIPTVDYSKLDLHPIRKNFWVEPAELAALTEEEANELRLELDGIKVSGKNIPKPV
QKWAQCGLTRRTLDVLADMGFDKPTSIQMQALPVIMSGRDVVGVAKTGSGKTLAFLLPMF
RHIMDQPPLKDTDGPIGLIMTPTRELAVQIHRDCKPFLKAMGLRSVCAYGGAPIRDQIAE
LKRGAEIVVCTPGRMIDLLAANQGRVTNLRRVTYAVLDEADRMFDMGFEPQVMKIFANIR
PDRQTILFSATMPRIIDSLTKKVLKSPVEITVGGRSVVASDITQVVEIVPEDQKFYHLLG
LLGELYDKDEDARSLIFVERQEKADDLLKELMTKGYPCMSIHGGKDQVDRDSTISDFKKG
IVPILIATSVAARGLDVKQLKLVVNFDCPSHSEDYVHRCGRTGRAGNKGTAVTYITEEQE
SCASAVAKALEQSGQPVPERLEEMRKAWKEKVKSGKAKDTSGFGGKGLDRLDAEREAARL
RERKTHKAEGEDDDVKEEKTEEDKAKSSVTDIQSKVSAIVSRNTSKPEGDSKGKDAPAAT
GKGGQPLDMVSAAIRNINERLGKAGQLRSGQPIDNKGPDAGAYHATLEINDFPQKARWAV
TNRTNVAKILEATGVSITTKGTFYPAGKEVPAGADPKLYILVEGDTEVVVGAAMTELTRL
LSEGTVAAATADSRAPASGRYNVV
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaccagggactcgcgctcaccatcgcctgcaggaagtcaacacaatgcgaga
cgcccccgtaaagacgatgacaggcgcgatcgggaccgtcgcgatgacggcggcagagaa
taccgtcgtcgttcgcggtcgaggagccctgccgacgtgagaagccaccgccatgggaga
cgtgacggggagcattctgacaagtaccacgagcagcgccgattccgagaccgcgaccgt
gatcgcgactctttccgacgcagagatcgctccgtagaccgaagagacgattcctaccgc
ggaggtcgccgagacaatgaccgcaacagagaccgcaggaggtcccgggacagatacgcc
gatcgcgaccgctctttggacagacgacggccccgcgatggcgacagggatcatcgccca
aggatggacgactctagagatcgagctcacgcgaggcgagagggaactgctgactcccgc
ccccgcagcaggcgcgatgacagccgtccgcgcggtgcggcgctttcagagaatgccagc
gctcccgttaacgaggctaccaagcccaagcccgccccagctcagaccgaagctgacaaa
aaggccgagcgacttgccaggctcgaggcgtggaagaagagcagggagaccaaagccaat
aaagagaatgaggttaatccaagtcagactaggaatctcctcgcagagatggacagaaag
tccgtgccgtctccggcccccgcctcgccatctgttgcctcaccagccgttgcatcaccc
ggagcagcatcgcctgcgcccacccagactaccgcgtcgggagccgcctcgccggcccct
tttgcgggcaagtttgaccccaaggccatcgcgaagaaatctgcggcgtcgcacaagagt
tctggtacaaatggtgtactgggttcgctccagggtcgccctgaaaagtcgattgcgcct
gtcgcaccaatcaccaaaggtttgcctgtaccatctccagcggggggcttttacgctaac
aaatcgacaacagcttcggcactgcctgccaaccgcaacgtgagtgctttcggcttcagc
aaggcgacggccgacagcgagaagcttgcaaacaagcgcaagttggacctcgatgaggag
gagggaacgaaaaggaaactcacgaagttgcccgcacttcccctcgaggctgatgacacc
ccctatgctgatcaagacgaagacgacgagtctgatggtggcaactttgccgagactgag
gaagaggctgctgccgccgctcgcgcagcacacgagcggcgtgagagagagctgcaagag
caagaaccgcaagaagaggcgaagcccgatgtagacatgcaagacgctgcgctgccgcaa
attaatgacaccgccgaagaacctgcagccgagcagatggatgtcgaagaggaagatgac
gttgatcctttggatgcgtttatggctgatttatcagacgccaaagccaaacccacgggt
cacaaggcaagtacatcatcgaagaaggcccaagagccagaggcgtacttcagtgacgat
gagtatgctttcaagacagaagacggcaaggatccaaacgctgttcttgccatggcagcg
aagcgcaagaagaaggacatccctaccgtcgactacagcaagcttgacctgcatcccatt
cgcaagaatttctgggttgaaccagcagagcttgccgccctgaccgaggaggaagccaac
gagctccgtctggaacttgacggcatcaaagtctctgggaagaacatcccgaagcccgtt
cagaaatgggcgcagtgcggattgacacgccgcactttggatgttctggcagatatggga
ttcgacaagccgacttccattcaaatgcaggctctccccgtcatcatgtcagggcgcgat
gtggtcggtgttgccaagactggatctggtaaaacgcttgccttccttctccccatgttc
cgccacatcatggaccaacctcccctcaaggacacagacggtcccatcggtcttatcatg
acgcccacccgcgagttggctgtccagatccaccgcgattgcaagccttttctgaaggca
atgggcctgcggtctgtttgcgcatacggtggagcgcctatcagagatcagattgccgag
ctcaagcgcggggcggaaatcgtcgtgtgtactcctggccgtatgatcgatctattggcc
gccaatcagggtcgcgtcacgaacttgcgtcgtgtcacatatgcagtgcttgatgaggca
gatcgcatgttcgacatgggatttgagcctcaagtcatgaaaatctttgcaaacattcgt
cctgaccggcaaaccattctattctcggcaacgatgcctcgcatcattgactcgttgacg
aagaaggttcttaagtctccggtcgagattacagtcggaggccgcagtgttgtcgcatcg
gatatcacgcaggtcgtggaaattgtccccgaagaccagaagttctaccatctcctggga
ctgctcggcgagctttatgacaaagacgaagatgcacgatctctcatttttgttgaacgt
caagaaaaggctgatgacctgctcaaggaactcatgaccaagggttacccgtgcatgtct
atacacggtggtaaagaccaggttgatagagactcgaccatttcagactttaaaaagggt
atcgtgcccatcctcatcgcgacctcggttgccgctcgaggtctcgacgtcaaacagctc
aagttggttgtcaatttcgactgcccgtcccattccgaagattacgtccatcgttgtgga
cgaaccggaagagcgggtaacaagggtactgctgtaacctacatcaccgaagaacaggag
agctgcgcatccgctgttgccaaggcactcgagcagagtggccaacctgtacccgaacgt
ctggaagagatgcgcaaagcttggaaagagaaggttaaatcaggcaaggccaaggatact
tctggctttggcggtaaaggtcttgaccgactagacgccgagcgagaagcagcgcgtctc
cgcgagcgcaagactcacaaggccgaaggcgaagacgacgatgtcaaggaggagaagacc
gaggaggacaaagccaagagctccgtcactgacatccagtccaaggtgtcggctattgtg
tcccgcaataccagcaagcccgaaggcgactctaagggcaaggacgcaccggccgccaca
ggcaaggggggtcaacctctcgacatggtcagtgcagcgattaggaacatcaatgaaaga
ctcggaaaagctgggcagcttcggtcaggccagcctatcgacaacaagggccccgacgct
ggcgcttaccacgccacgctcgagatcaacgacttcccgcagaaggccagatgggccgtc
acgaacaggaccaatgttgcaaaaattctggaggctactggcgtgtcgatcacgaccaag
ggaaccttttacccggcaggcaaggaagtgccggctggcgcagaccccaagctctacatc
ctcgttgagggtgacactgaggttgtggtgggggccgccatgactgagctcacccggttg
ctcagcgaaggaactgtggctgcggctacggccgacagccgtgctcctgcttccgggcgt
tataatgtagtttaa
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integrated database retrieval system