Colletotrichum higginsianum: CH63R_02539
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Entry
CH63R_02539 CDS
T08176
Name
(RefSeq) guanylate kinase
KO
K12878
THO complex subunit 1
Organism
chig
Colletotrichum higginsianum
Pathway
chig03013
Nucleocytoplasmic transport
chig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CH63R_02539
09122 Translation
03013 Nucleocytoplasmic transport
CH63R_02539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_02539
03041 Spliceosome [BR:
chig03041
]
CH63R_02539
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
CH63R_02539
Spliceosome [BR:
chig03041
]
Complex C
Other components
EJC/TREX
CH63R_02539
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CH63R_02539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Guanylate_kin
MMR_HSR1
AAA_18
nSTAND3
Motif
Other DBs
NCBI-GeneID:
28861621
NCBI-ProteinID:
XP_018162330
UniProt:
A0A1B7YP69
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All DBs
Position
2:2639093..2641966
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AA seq
898 aa
AA seq
DB search
MPAAVTSDRHQMPGVIAFAELLDDLLARSMEVKSTPTIEPALQKIDFGDLDDQLARVLTT
PEQQNGTEIATQNKAQQFATIETAVRNMFSNLIATTSIESPDFVKVWNLFDLLTILSDDE
KCDPALLFWLVEELLDSQTIAGCRKIFDFLESRRERITVKHFKQKQLVILRSCNELLRRL
SRAEDTAFCGRVFIFMFQSFPLGDKSSVNLRGEYHVENVTVFDDTGVKTDESTEQMDIDS
QNGVKDGEVKSQAKAVSFDAKQPTQPDQPLNPDALYPQFWSLQETFSQPKKLFDPSHLAN
FKRGLEATMTSFRAIQNEQGQRPPKAVDEAQRGLKRKRDDVEGSDLANSYNPKYLTSRDL
FELEMSDISFRRHILVQALIIMDFLLSLSNKTKEKLAGNAQNKSVIYLGQVLSEEDVCNH
FESAGLQTARLTDDKTKWASEMKRTIVDKYLKHGVDGPYFSRMVETVLARDKNWIRWKSE
NCPSIELPAVSPDLFVEAKKVAQRTTTKKRLRAMPMGSLPLGFLEDGGDETAMQKLKAEE
RYSLPELEIFKRKIADDDFEIDMPTTNQTKTAAIESKASKSWRALRIASKSRLALFDKID
DPEKIDAVFEEPVDVDEGEAAAEEEVNNDNVPEDKRPIIISGPPGAGKATIFGLLAERRP
GAFTRVPRHTTRKPQEGEVEGKDFYFVEPQAFNMLRDGDALLEFTTIDKVDYGTSRKAVE
AAVEGGKVPIMYMDGEAIQQARELGYSARTILVLPPSLDILEERLRKAEKDDDAVQEALA
QAAPYFEADSKLKEEFDVLLTNQELDATFKAFEGHVYGTSEATLTNGKLEDETMEEADET
MVDVASEELQASQAPQASQEAQEPQESKENEVIAESTEPMEVTQTEEAGETKGTPEAS
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgctgtcacatccgatcggcatcagatgcctggggtaatcgcgtttgccgag
ctgctcgacgacctcttggctcgctcaatggaagtcaaatctacccccacgatcgagccc
gcattacagaagatagacttcggcgatctggacgatcaacttgcacgcgttctcacgaca
ccagagcagcaaaatggaaccgaaatcgcgacacagaacaaggctcagcagtttgcaacc
attgagactgcagtgcggaacatgttcagcaacttgattgccaccacatccatcgagtcc
ccggatttcgtcaaggtctggaacctgttcgacctcctcaccatcctctccgatgacgaa
aagtgcgacccggccctccttttttggctggtggaagagctcttagacagccagacaatc
gctggatgccgcaagattttcgatttcctcgaatcaagacgcgaaagaataaccgttaag
cactttaagcaaaagcagttggtcattctgcgcagttgtaacgaactgctgcgacgcctg
tctcgtgctgaggatacggcgttttgcggtcgggttttcatcttcatgtttcagagcttt
cccttgggtgacaagagctctgtcaacttgcgaggagaataccacgtcgagaacgtcacc
gtattcgacgacacaggcgtcaagacagacgaatcgacagagcagatggatatagacagc
cagaatggtgtcaaagacggcgaagtgaagtctcaggcaaaggccgtttcattcgatgcg
aagcaaccgacacagcctgatcaaccgcttaaccctgatgcactgtatcctcagttttgg
tcactccaggagacttttagtcagcccaagaagctattcgatccttcccacttggcgaac
ttcaaacgtgggcttgaagcaaccatgacttctttccgggccatacagaacgaacaaggt
cagagaccacccaaagcagttgatgaggcacagagaggtctaaagaggaaacgagacgat
gtggaaggaagtgacctggcaaattcctacaatcccaaatacctcaccagccgggatctc
tttgagcttgaaatgagcgacatttccttccgcagacacatacttgttcaagccttgatc
atcatggacttccttctctctttatcaaacaagacgaaagaaaaactggctggcaatgcc
cagaacaaatcggtcatctaccttggccaggttctgagcgaagaagacgtatgtaatcac
ttcgaatctgctgggttacaaacagcgaggctaacagatgataagaccaagtgggcttcg
gagatgaaaaggacgattgttgataaatacctcaagcatggcgtcgatggcccgtacttc
agccgcatggttgagacggtcctcgccagggacaagaattggatccgttggaaatccgag
aactgtccgtcgatcgagttgccggcagtgtctcctgatttgttcgtcgaggccaaaaag
gttgctcaacgtacgacaacgaagaagcgtctgagggccatgccgatgggctcactgcca
cttggcttcttggaagacggcggtgacgaaactgcgatgcagaagctcaaggccgaggaa
agatacagtctgccagagcttgaaatctttaaacggaagattgcggatgacgacttcgag
attgatatgccgacaaccaaccaaaccaagaccgccgcgattgagagcaaagccagcaaa
agttggcgagccctccggatagcgagcaaatcaaggttggccctctttgacaagatagac
gacccagaaaagatcgacgccgtgtttgaagagccggttgatgttgacgaaggtgaggct
gctgcggaggaagaggtaaacaatgacaatgtccccgaggacaagcggccaatcatcata
tcaggaccgcccggggccggcaaagcgactatattcggtcttctcgcagagcggcgtcca
ggcgcgttcacgcgtgtgcctcggcataccacaagaaagccgcaagagggtgaagtcgag
ggcaaggacttctatttcgtcgaaccgcaagctttcaatatgttgagggacggcgatgcg
ttgttggaattcacgactatcgacaaggtagactacggcacgagtcgcaaggccgtggag
gcggctgtcgagggtgggaaggtcccaatcatgtatatggacggcgaggctattcaacaa
gcacgggaacttggctattcggcacgaaccatcctcgttttgccaccgagtctcgacata
ctggaggagcgtctcaggaaggcagagaaggacgacgatgccgtgcaggaggctctcgcc
caagcagctccttattttgaggccgattcgaagctgaaagaggaattcgatgtacttctt
accaatcaagagctggatgctaccttcaaggcttttgagggacacgtatacggcacttcc
gaggcgacactcacaaatggcaagctggaagacgagacgatggaggaagcagatgagacc
atggttgatgtggcgagcgaggaactacaggcttcacaggcaccgcaggcgtcgcaggaa
gcccaagaaccgcaggaaagtaaggagaacgaagtgattgcggaatccacggagcctatg
gaagtaacacagaccgaagaggctggtgagaccaaaggaactccggaggcatcttag
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