KEGG   Colletotrichum higginsianum: CH63R_02683
Entry
CH63R_02683       CDS       T08176                                 
Name
(RefSeq) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
chig  Colletotrichum higginsianum
Pathway
chig03030  DNA replication
chig03410  Base excision repair
chig03420  Nucleotide excision repair
chig03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:chig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CH63R_02683
   03410 Base excision repair
    CH63R_02683
   03420 Nucleotide excision repair
    CH63R_02683
   03430 Mismatch repair
    CH63R_02683
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:chig03032]
    CH63R_02683
   03400 DNA repair and recombination proteins [BR:chig03400]
    CH63R_02683
Enzymes [BR:chig01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CH63R_02683
    6.5.1.6  DNA ligase (ATP or NAD+)
     CH63R_02683
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     CH63R_02683
DNA replication proteins [BR:chig03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CH63R_02683
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     CH63R_02683
DNA repair and recombination proteins [BR:chig03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CH63R_02683
   NER (nucleotide excision repair)
    Other NER factors
     CH63R_02683
   MMR (mismatch excision repair)
    Other MMR factors
     CH63R_02683
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 28861765
NCBI-ProteinID: XP_018162474
UniProt: A0A1B7YPG9
LinkDB
Position
2:3204283..3207347
AA seq 914 aa
MACARLLSSPIPRRNVLRAAAFCNDTRLFTVYIQPRITMPPKQATLGKFFGAKGSRPEPQ
QSKLSFATKAAPKKAVERKADAPDAAVKKENSRKRTRSPSPANKASSPKVKDETTEEDEE
DEPATKRPRRVRQRIVEEEEEDEMMNEVPAKSSVGSPKASRTKKSSPLKPTKAVKAKADA
PDSSRSKRASKSPSPTVVVEHEKEEATESASEDDLAEDDEEDIKPAVAKKTLEKVQMRLK
TQTKDPYPDWKQGEPVPYAALCTTFSLIELTTKRLEIMAHCSLFLRQVLRLTPDDLLPTV
LLMINKLAPDYAGIELGIGESLIMKAIGETTGRSLAVIKQDQKEIGDLGLVAVKSRSTQP
TMFKPKPLTISGVHKGLMGIATVSGNGAQGRKVDAIKKLLSAADSHSSGKVDISKDKGGP
SEAKYLVRFLEGKLRLGLAEKSVLVSLAQAVAFHEADAKGQVPKTTDVEQAEAILKTVYS
ELPSYDVIIPAMVEHGIMNLREHCKLKPGVPLKPMLAKPTKAITEVLDRFEDQTFTCEYK
YDGERAQIHYVAKSADEEISQSLPGATKAAADGVASIFSRNSEDLSKKYPDILAKLHTWV
KEDTKSFVLDCETVAWDVEEKKVLPFQQLMTRKKKDVKIEDVKVKVCVFAFDLLYLNGEA
IVERPLRERRDLLEDAFQPVEGEFSFATHMDGQELEQIQVFLDESVKASCEGLMVKMLDG
SESGYEPSKRSRNWLKIKKDYLSGIGDSLDLVVLGAYHGKGKRTSVYGAFLLACYNPSSE
SYETVCNIGTGFSEAVLEELHTQLSDIVIDRPKPFYAHSSGGQHQPDVWFEPRYVWEVKT
ADLTLSPRYKAGCKEGVDPGGEKGISLRFPRFIKVRDDKKPDEATSSRQVAEMYRKQESV
TKSKGPAADDDFEY
NT seq 2745 nt   +upstreamnt  +downstreamnt
atggcctgcgcccgccttttaagcagcccaattcctcgcaggaacgtactcagggcggcg
gccttttgcaacgatactcgactcttcactgtttatattcaaccacgcatcacaatgccg
ccgaagcaggcgacactgggcaagttctttggagcaaaaggctccaggcccgagccgcag
caaagcaagctcagcttcgctaccaaggcagcgcccaagaaggcggtcgaaaggaaggcg
gatgctccagacgcagcagtcaagaaagaaaattccaggaaacgaaccagaagcccgagt
cccgccaacaaggcatcgagtccgaaagtcaaggatgagaccactgaggaagatgaagag
gacgaacctgccacaaagaggccccgcagagttcgtcaacgtatcgttgaggaagaggaa
gaggacgaaatgatgaatgaagttccagccaagtcgtccgtagggtcgcccaaggcctcg
aggaccaaaaagagtagccctttgaaaccaacgaaggctgtcaaggccaaggcggacgca
cccgattcttctcgttcgaagagagcttccaagtctccctcgcctacggtggtcgttgaa
cacgagaaagaggaggcaacagaatctgcgtccgaagacgatttagctgaagacgacgaa
gaggatatcaagcctgcggtagcgaagaagacactggagaaggtacagatgagactcaaa
acgcagaccaaagacccgtacccagactggaaacaaggcgaaccggttccttacgccgcg
ctctgcaccaccttctctctaatcgagctcacgaccaagcggcttgaaatcatggcccat
tgctcgctgttccttcgacaggtcctgcgcttgacccccgacgatctgcttcctaccgtc
ctcctaatgatcaacaagctagctcctgattatgccggtatcgagctaggaatcggcgag
tctctcatcatgaaagccattggcgagacaacaggtcgcagtcttgccgtcatcaagcaa
gatcagaaagagattggagatcttggtctcgtcgccgtcaagagtcgatcaacacagccc
actatgttcaagcccaaacccttgacgatcagtggcgtgcataagggtctgatgggtatc
gctactgtttccggcaacggtgctcaaggtcgcaaagtggacgctatcaagaagctactg
tcggcagctgattcgcattcctctggaaaggtggacatcagcaaggacaagggtggcccc
agcgaagccaaatatcttgttcgattcctcgagggcaagctccgcttaggcttggccgag
aagtctgtccttgtctctttagctcaagctgtggcatttcacgaggcagatgccaagggt
caggtgcccaagactacagacgtggagcaggcggaggccattctcaagacggtgtacagt
gaacttccgagctacgatgtcatcatacccgccatggtggagcacggcatcatgaacctt
cgggaacattgcaagctcaagcctggagtgcctctcaagcccatgttggccaagccaacg
aaggctatcaccgaggtgctggaccgcttcgaggaccagaccttcacatgtgagtacaaa
tacgacggcgaacgagcccaaatccactatgtggccaagtctgccgacgaggagatcagt
cagtctctgccgggtgccacgaaggctgcggcagatggagtagcttccatcttttctcga
aattccgaggacctgtcaaagaagtaccctgatattctcgccaaactacacacttgggtt
aaagaagacacaaagagcttcgtgctggattgtgagacggttgcctgggatgtcgaagaa
aagaaggtcttaccattccagcaattgatgacgcgtaagaagaaggacgtcaagattgag
gatgtcaaggtcaaggtgtgcgtgttcgcctttgatttactctatctcaatggggaggcc
atcgttgagaggccactccgcgaacgtcgcgatcttctcgaggatgccttccagcccgta
gagggcgaattctccttcgccacgcacatggacgggcaggagctggagcagatccaagtg
ttcctcgacgaaagcgtcaaggcatcctgcgagggtctgatggtcaagatgttggacggc
tcagagagcgggtacgagcccagcaagagaagtcgaaactggctcaagatcaagaaggat
tacctcagcggcatcggcgactcgctcgatctcgtcgtgctgggcgcatatcacggcaaa
ggcaagcgtacatccgtctacggcgcgttcctgcttgcatgttataacccttcgtccgag
tcgtatgaaactgtctgcaatatcggtacaggattctccgaggccgtcctcgaggagctg
cacacgcagctctcggacatagtcattgaccggcccaaaccgttttacgcacactcctcg
ggtgggcaacatcagcccgacgtgtggttcgagccgcgttacgtctgggaggtcaagacg
gctgacctgacgctaagcccgcgatacaaggccggttgcaaggagggtgtcgacccaggc
ggtgagaagggcatcagtctacgattcccgcggttcatcaaggtgcgcgacgacaagaag
cccgacgaagctacgtccagccgccaggtggccgagatgtaccgcaagcaggagagtgtg
accaagagcaagggtcccgcggcggatgacgatttcgagtattag

DBGET integrated database retrieval system