Colletotrichum higginsianum: CH63R_05654
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Entry
CH63R_05654 CDS
T08176
Name
(RefSeq) DEAD/DEAH box helicase
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chig03009
]
CH63R_05654
Enzymes [BR:
chig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CH63R_05654
Ribosome biogenesis [BR:
chig03009
]
Eukaryotic type
90S particles
Helicases
CH63R_05654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
28864736
NCBI-ProteinID:
XP_018158479
UniProt:
H1V8J7
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All DBs
Position
4:1087791..1089914
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AA seq
707 aa
AA seq
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MDILKVLSRGIKQPPKGAKGASKPPANLPSAGNRTNPQLFHDEVPSARGHKRKRGRDEVE
EKEEERLPEVDFFAPKPDPSEEAAKVKEAAAKEKKNAPPPSPAVKPKLLPEDECRQILRS
HRLKLTLLSERHKNPSKVTKSKKKKKVAVEVEKETNQLHPQPLTTFRELRTNYGIAPLLA
ENLAHQGFKVPTEVQLGALPLLLQPELALKEVPRNEELGDVSKGIDFLAVAPTGSGKTIS
FLIPAINSIMQKRATVEDQDEHDLSAIIIAPTRELVFQIVNEARKLAQNSGIKVAGMKKG
MRLAVEEEEKPESEDEEEEDEDDGEKSDDDEDSETEPARTKSVVKADILVTTPALFFNFL
TSGSPTTNRKLPNVTSLILDEADVLLDPLFREQTMAIWSACPNPALRTTFWSATFGSNIE
TLVTEAQSAKPEPKPLIRLVVGLKDTAVPNVTHKLVYTATEKGKLLGLRQLLHPTAGDDS
GPPLRPPFLVFTQTIERATALEEELKYDIPLAAGGATRIAALHSGLADRARADIMRRFRA
GEVWILITTDVLARGVDFAGVNGVVNYDVPGSSAAYVHRAGRTGRAGREGGVAVTFYTTD
DIPFVKSVANVIAASEKQAGKTGDEANVQKWLLDALPNVSKADKKRLKEKGVEARRSHGA
AMISSQSKWDRRKETNRQGATAANKQRMKHARRVDEGDGGEWGGIDD
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggacatcctcaaagttttgtcgcgcggcatcaagcagcctcccaagggcgccaagggc
gctagcaagccgccagcgaatctgccgtccgccggcaaccggacgaacccccagctcttc
cacgacgaggtgccctcagcgcgcggccacaagaggaagcgcggtagagacgaggtcgag
gagaaggaggaggaacggctgcccgaggtcgacttcttcgcccccaagcccgacccctcc
gaagaagcagccaaggtcaaggaggccgccgctaaagagaagaagaacgcaccacctccc
tcccccgccgtcaagccgaagctgcttcccgaagacgagtgccgacagatcctccgctcc
caccggctgaagcttaccttgctttccgagcgccacaagaacccgtccaaagtgaccaag
agtaagaagaagaagaaggtcgccgtcgaggttgagaaggagacaaaccagctgcacccc
cagcccttgaccaccttccgcgagcttcggacgaactacggcatcgcgccgctgctggcg
gagaacctcgcccatcaggggttcaaggtgccgaccgaggtccagctcggcgccttgccg
ctgcttttgcaaccagagcttgccctgaaggaggttccccgtaacgaagagcttggcgat
gtctccaagggcatcgatttcctcgccgtcgcgccgacaggcagtggaaagacgatcagt
ttcttgatccccgccattaactcgatcatgcagaagagggccactgtagaggaccaggac
gaacacgacctatccgccatcatcattgccccgacgagggaactcgtcttccagatcgtg
aacgaggcgcgcaagttggcccagaactcgggcatcaaggtggccggaatgaagaagggc
atgcgcctagctgtcgaggaggaggagaagcccgagagcgaggacgaagaggaggaggat
gaggatgatggtgagaagtctgacgacgacgaggacagcgagacagagcccgccaggaca
aagtctgtcgtcaaagccgacatccttgtcacaacgccggcgcttttcttcaacttcctc
acgtcagggtcgccgacgacgaaccgcaagctccccaatgtgacgtctttgatcctcgac
gaggcagacgtgctacttgaccccctgttccgtgagcagaccatggccatctggtccgcg
tgccccaaccccgcgctgagaacaaccttctggtcggcgacctttggctccaacatcgag
accctcgtcaccgaggcgcagtcggcaaagcccgagcccaagccgctgatccgtctcgtg
gtcggcctcaaggacacggccgtccccaacgtcacccacaagctggtctacaccgcgacc
gagaagggcaagctcctgggtctgcgccagcttcttcaccccacggccggagacgattca
ggcccgccgctgcggcctccgttcctggtattcacccagaccattgagcgcgcgacggcc
ctcgaggaggagctcaagtacgacatcccgctcgcggccggcggcgccaccagaattgct
gcgctgcacagcggcttggcggacagggcacgcgcggacatcatgcgccgcttccgcgcc
ggtgaagtgtggatcctcatcacgacggacgtgctcgcgcgcggcgtcgacttcgcgggc
gtcaacggcgtcgtcaactacgatgtgcccggttccagcgccgcgtacgtccaccgcgct
ggccgcacgggccgggctgggcgcgagggcggcgttgccgtcaccttttacacgacggac
gacatccccttcgttaagagcgtcgccaacgtcatcgccgccagcgagaagcaggccggc
aagacgggcgacgaggccaacgtgcagaagtggctgctcgacgccctgcccaacgtcagc
aaggccgacaagaagaggctgaaggagaagggtgtcgaggcccgacgcagccacggggcc
gccatgatctcgtcccagagcaagtgggaccggcgcaaggagacgaataggcagggtgcc
accgcagcgaataagcagaggatgaagcacgcccgaagggtagacgagggtgatgggggg
gaatggggcggcatcgacgactaa
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