KEGG   Colletotrichum higginsianum: CH63R_06700
Entry
CH63R_06700       CDS       T08176                                 
Name
(RefSeq) transcription factor tfb2
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
chig  Colletotrichum higginsianum
Pathway
chig03022  Basal transcription factors
chig03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:chig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CH63R_06700
  09124 Replication and repair
   03420 Nucleotide excision repair
    CH63R_06700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chig03021]
    CH63R_06700
   03400 DNA repair and recombination proteins [BR:chig03400]
    CH63R_06700
Transcription machinery [BR:chig03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CH63R_06700
DNA repair and recombination proteins [BR:chig03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CH63R_06700
SSDB
Motif
Pfam: Tfb2 Tfb2_C Helicase_C_3
Other DBs
NCBI-GeneID: 28865782
NCBI-ProteinID: XP_018159525
UniProt: A0A1B7YGR8
LinkDB
Position
4:complement(4589920..4591579)
AA seq 497 aa
MSVSSGQSLQLADYLEKLPGTTFRKLYLQPSTAFAIFRRMIPPLAKTIVMAILYMPKPML
LEDLDVWVKPESRRQKDQAISTLRSLHILQITVPSKERPQEMQLTTNFKSSLRLALEGGG
THNSFGVPSSLPVPPEITVPFLDRYARRKWEDILHYIVNTVNPGGADLGGPKSSVKNLLV
AGQLVRRQGSAVGITQAGFTFLLQEANAQVWTLLLLWLEATDHAEDAAGMESTDMLSFLF
LLASLELGRAYDTNALTEARRNMLPSLLDFGLIYIPSHKPQQYFPTRLATTLTSSSSALR
SAGAGFSAALAAATGPRPSPSNGLTPGGSEEGKGGGSIIVETNYRVYAYGQTPLQIAVLS
LFCKLKLRFADMVSGRLTRNSIRNAVERGITADQIISYLAAHAHEQMHRMAAVRSRPVLP
PTVVDQIRLWQLETERMTTTSGFLFRDFDSPKEYEVIAGYASEIGVLVWRNDKLGMFFAS
KHEQIRDYLKLRKKAED
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgtcggtcagctcgggtcagtcgctccagctggccgactacctggagaagctgccgggt
acgacgttcaggaaactctacctgcagccctcgacggcctttgccatcttccgaagaatg
attccgccgttggcaaaaaccattgtcatggccattctctacatgccgaagcccatgttg
ttggaagatttggacgtctgggtcaagccggagtcgcgaaggcagaaagaccaggccatc
tcgacgctccgcagcctccacatcctccagatcacggtcccttcgaaggaacgccctcaa
gagatgcaactcacgacgaacttcaagagctcgctgcgccttgccctcgagggcggcggc
actcacaactcgttcggcgtgccctcttccctccccgtcccgcccgagatcacggtcccc
tttctcgaccgttacgcccgccgcaagtgggaggatatcctgcactatatcgtcaacacg
gttaaccccggcggcgccgacctgggcggacctaagtcgtccgttaagaacctgctcgtc
gccggccagctcgtccgccgccaggggtccgccgtcggcatcacccaagcaggctttacc
ttcctcctgcaggaggctaacgcccaggtctggaccctgctgctgctgtggctcgaggcc
accgaccacgctgaggacgccgccgggatggagagcaccgatatgctgagcttcctcttt
ctcctcgccagccttgagctcggcagggcctacgacacaaacgccctcaccgaggcgcgc
cgcaacatgcttcccagtctgctcgactttggtctgatctatatcccctcacacaagccc
cagcagtatttcccaacccgcctcgcgacgacactcacgagcagctctagcgcccttcgc
agcgccggcgccggcttctccgccgctctcgccgctgcgaccggcccgcggccctctccc
tccaacggcctcacgccgggcggcagcgaggagggcaagggcggcggcagcatcatcgtc
gagacgaactacagagtctacgcctacggccagactcccttgcagatcgccgtgctctcg
ctcttctgcaagctcaagctgcgcttcgccgacatggtgtcgggccggctgacgcgcaac
tcgatccgcaacgccgtcgagcgcggcattacggccgaccagatcatctcgtacctcgcc
gcgcacgcgcatgagcagatgcaccgcatggccgccgtgcgcagcaggcccgtgttgccg
cccaccgtcgtcgaccagatccggttgtggcagctcgagactgagcgcatgacgacgacg
agtggcttccttttccgcgactttgacagccccaaggagtacgaggtcatcgccggctac
gcctctgagatcggcgtgctcgtgtggcgcaacgacaagctcggcatgttctttgcgagc
aagcacgagcagattagggactatctcaagttgaggaagaaggccgaggactag

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