Colletotrichum higginsianum: CH63R_14251
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Entry
CH63R_14251 CDS
T08176
Name
(RefSeq) LysM domain-containing protein
Organism
chig
Colletotrichum higginsianum
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_3
End_N_terminal
DNase_NucA_NucB
Motif
Other DBs
NCBI-GeneID:
28873332
NCBI-ProteinID:
XP_018151543
UniProt:
A0A1B7XTD3
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All DBs
Position
10:2640655..2645814
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AA seq
1693 aa
AA seq
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MAPFHSALAMSLAALLALDHSQASAQYIQNFDHTRITNPLTGTTKAVPDNRVAWRNVIDL
GSTETVYLFYNCYYMTNICENVRAFMGSARGQNLHPGTTIPSNVFTYDFVTGDESWTRQS
GRRGQSCPSGWGGNGRCPQAGQEIPWRHDGPWWTTILEPGTTTNMLRHERDPQGNIVKKS
QMRYTCDEFPPATWVEGGNGWSNNQPANTWCAGQACVDYTVNNNGVSIKAEQDWQASAHK
LLRIVLLRHIGDRVAEFDWHVPSQPQKDMAFFRFSAMDMGPDGVAASIFTSNQDTGVDSE
PQYVTQQRRRGFNLTADEEDPDEPTRVPRSRYGLSAEEAVKRMRAGHSRHVVNIPAEFNE
SFVTTEPGFGSMATSPNLNMNSTTSRRSETPVQPKKSKTPAPVSKRQDGPPVEAAKPLLK
AASPRDLERAHDIVATAIAASAKLNKARLASPIRNQYRLKPGTVIGTTVNERRRARRDDS
PPPTPLLEITDEIAWAAALLAEAEAEVPEDGVKLPLPPGRNVTRRAAAARGSYWMESIAR
KGTVPWGDDPSYAVFRNVLDYGAAGNGVTDDTAAIKRAMNDGRRCGEKCNGSTVKNAIVY
FPPGTYLISSTVPLPFGTQVIGDAIDRPVLVASKSFIGLGVLSTDEYTGGGTGPDGHDQQ
WYVNTANFYRQIRNIIIDVRPAPPSQETACLHYQVAQATSMQNVELRAGAGQKGIFAENG
SGGGISDVTFVGGDVCLYGGEQQFTAQRLVFRGCDVGVQVIWDWGWVWKSVTMTDVKTGF
KFVPEYPDGNIGSSLIMDSSFTNVGTVVVIQPPSSEAGSGSTGLVIENIRMSGVTTAVAD
TNGRSLLAASARVDEWVLGPVYSSSADAGARSFSSGGKIGKYRRDGGLVDAQGAYYERPK
PQYEGRGVGDFLHVKDFGARGDGVTDDTAAFQRAVDSSQGKILFVDAGSYILTGTVTVPA
GVKMVGETWSQLVARGPAFSDETKPTVMLRVGRPGQVGNVEMQDLIFTTKGPTAGAVLIE
WNMAADAKGSAALWDCHVRIGGAAGTDLTPAECPALTSGIAPGCNAASLMMHIKPGASGY
FENMWLWVADHMIDDPDLEDANNTMVQNSVYVARGLLVESTEPTWLYGTSSEHAVMYQYN
FHNAASIFAAMIQTESPYYQPTPNPPAPFGNTVGLFPGDPDYSCAAGDEFGGCDESWAVV
MRGCEDIVVAGAGLYSWFSTYSQDCIGGQLCQKALVLLKGNHASVRWEHLVTIGAKYMAV
MDGKGIAAKDNLNVDAHPFWSQVSLLDVASDGEQYNDVLWLDPGIWDMAQPEFECQPPCR
VKIPPYTGATTTVNYPLMTVSSDAWTSTITVPPMTLSKLGFEVMTLVEGGPNVKRDGLNR
RAFEDFWPIPATTAAWPVVIYNGPDGKVSTASPKTAYPTPPPSVEPGSPPPQKGAWPARA
LRPRAAYGLDPNKELSDSLRDWMCQRAAESPSLYDMDLLDCPNTKRPNNDSGQVPMGEGW
GWDVPQISNNGTMILPGFGAPFNQIINILGRMCEQPQQTKTSTTIRAQTTQPSRPTEKPL
ARPDANQNEIKCFGSGHKMGNTRLRLGIESFCSNIGSDALGVGARGLNDRRAATGELTGG
YKRRDTKTLDKNDKISFSFEVMDGCAWTFDLDECARYFKTAVDSCNCDGENGKQGGYGGN
NCLKWMTDPEYKL
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atggctccgtttcactccgccctcgccatgtcgctcgcggcgctgctcgccctagaccac
agccaggcgagcgcccagtacatccagaactttgaccacacccgcatcacaaaccccttg
actggcaccaccaaggccgtccctgacaaccgggtcgcctggcgcaacgtcattgacctc
ggcagcacagagactgtctacctcttctacaactgctactacatgaccaacatctgcgag
aacgtccgcgccttcatgggctccgcccgcggccaaaacctccaccccggcaccaccatc
ccgtccaacgtgttcacctacgacttcgttacgggcgacgagagctggacgcgtcagtcg
ggccgcaggggccagtcctgccccagcggctggggtggcaacggccgctgcccccaggcc
ggccaggagatcccctggcgccacgacggcccctggtggacaacgatcctcgagcccggc
acaaccacaaacatgctccgccacgagcgcgacccccaggggaacatcgtcaagaagtcc
cagatgcgctacacctgtgatgagttcccccccgccacctgggtcgagggcggcaacggc
tggtccaacaaccagcccgccaacacctggtgcgccggccaggcctgtgtcgactacacc
gtcaacaacaacggcgtctccatcaaggctgagcaggactggcaagccagcgctcacaaa
ctgctgcgcatcgtcctcctccgccacatcggagaccgagttgcagagttcgattggcat
gttcccagccaaccgcagaaggacatggccttcttccgcttctccgccatggacatgggg
cctgacggcgtggccgcctccatcttcacgtccaaccaagacaccggcgtggacagcgaa
cctcagtacgtcacccagcagaggaggcgcgggttcaacctcaccgcggacgaagaggac
ccggacgagccgacgcgcgtgccccgttcgcggtacgggctcagcgccgaggaggccgtg
aaacgcatgcgcgccggccacagccgccacgtcgtgaacatccctgccgagttcaacgag
tccttcgtgacgacggagccgggttttgggagcatggctacctcgcccaatctgaatatg
aacagcacgacgtcgcgccgttccgagacaccggtgcagccgaagaaaagcaagacgccg
gctcctgtctccaagcgtcaggacggcccgccggtagaggccgcgaagcctctcctcaag
gcggcctcccctcgtgatctcgaaagagcccacgacatcgtggccaccgccatagccgcc
tcggccaaactcaacaaggcccgtctggcaagcccgatacgcaaccagtacaggctcaag
cccggcaccgtcatcggcacgactgttaacgagcgccgtcgcgcccgccgcgacgactcg
ccccctcctacgccgctcctcgagatcaccgacgagatcgcctgggccgccgcgcttttg
gccgaggccgaggccgaggtgcccgaggacggtgtcaagttgccgctcccccccggccgt
aacgtcacgcgccgagccgccgccgccaggggctcgtactggatggagtccatcgctcgc
aaaggcaccgtcccctggggcgacgacccctcgtacgccgtgttccgcaacgtgctcgac
tacggcgccgccggcaacggcgtgaccgacgacaccgccgccatcaagcgagccatgaac
gacggccggcggtgcggcgagaagtgcaacgggtcgacggtcaagaacgccatcgtctac
ttcccgcccggcacgtacctcatctccagcacggtgcccctccccttcggcacgcaggtc
atcggcgacgccattgaccgcccggtgctggtcgcctccaagtccttcatcggcctcggg
gtgctgtcgaccgacgagtacaccggcggcggcaccggccccgacgggcacgaccagcag
tggtacgtcaacacggccaacttctaccgccagatccgcaacatcatcatcgacgtacgc
ccggcgccgccctcgcaggagacggcctgcctgcactaccaggtggcccaggccaccagc
atgcagaacgtcgagctgcgggccggcgcgggccagaagggcatcttcgccgagaacggc
agcggcggcggcatctcggacgtcacctttgttggcggcgacgtctgcctgtacggcggc
gagcagcagttcacggcccagcggctcgtcttccgcggttgcgacgtcggcgtccaggtc
atctgggactggggctgggtgtggaagtcggtgaccatgaccgacgtcaagacgggcttc
aagttcgtgcccgagtacccggacggcaacatcgggtcgtcgctgatcatggactcgtcc
ttcaccaacgtcggcaccgtcgtcgtcatccagccgccgtcgtccgaggccggctctggg
agcaccggcctcgtgattgagaacatccgcatgtcgggcgtcaccactgccgttgccgac
acgaatggccgctccctgctggccgcgtcggcccgggttgacgagtgggtgttgggcccc
gtgtactcgagctcggccgacgccggcgctcgttcattctcgtccggcggcaagatcggc
aagtaccgccgggatggcgggcttgtcgacgcacagggggcctactatgagcgtcccaag
ccgcagtacgagggccgcggcgtgggcgacttcctccacgtcaaggactttggcgcgagg
ggcgacggcgtgacggacgatacggccgctttccagcgggccgtagactccagccaggga
aagattctgttcgtcgacgccggctcatacatcctgacagggactgtgacggtgccggcg
ggcgtgaagatggtcggcgagacgtggtcgcagctcgtggcccggggcccggccttctca
gacgagaccaagcccaccgtgatgctccgggtgggccgtcccggccaggtcggcaacgtc
gagatgcaggacctcatcttcaccaccaagggcccgacggccggagccgtgctcatcgag
tggaacatggccgccgacgcaaagggctcggcagccctctgggattgccacgtccgcatc
ggcggcgccgcgggcaccgacctgacgcccgccgagtgccccgccctgacctccggtatc
gccccgggctgcaacgccgccagtctcatgatgcacatcaagccgggcgcgtcgggatac
ttcgagaacatgtggctctgggtggccgaccacatgatcgacgacccggacctggaggac
gccaacaacaccatggtgcagaactcagtctacgtcgctcgcggcctgctggtcgagagt
accgagccaacctggctctacggcacgtcgtctgagcacgccgtcatgtaccagtacaac
ttccacaatgccgcgagtatcttcgccgccatgatccagaccgagtcgccctactaccag
ccgaccccgaacccgcccgccccgttcggcaacaccgtcggcctcttccccggcgatccg
gactactcctgcgccgcgggcgatgagttcggcggttgcgacgagtcgtgggctgtcgta
atgcgcggttgcgaggacatcgtcgtcgccggcgccggcttgtattcgtggttctcgacc
tacagccaggactgcatcggcgggcagctatgccagaaggcgctggtgctcctcaagggc
aaccacgccagcgtgcgctgggagcatctcgtcaccatcggcgccaagtacatggccgtc
atggacggcaagggcatcgcggccaaggacaacctcaacgtcgacgcgcaccccttctgg
tcgcaggtgtcgctgctcgacgttgccagcgacggcgagcagtacaacgacgtgctctgg
ctcgacccgggcatctgggacatggcccagcccgagttcgaatgccagccgccctgccgc
gtcaagattccgccgtacacgggcgccaccaccacggtcaactacccgctcatgaccgtc
agctcggacgcgtggacgagcaccatcacggtgccgcccatgacgctgtccaagctgggc
ttcgaggtgatgacactggtcgagggcggccccaacgtcaagagggacggcctcaaccgc
cgagccttcgaggacttctggcccatccccgccacgaccgccgcctggcccgtcgtcatc
tacaacggcccggacggcaaggtgtcgacggcgagccccaagacggcctatccgacaccg
cctccgtccgtcgagcctggctcgccgccgccgcagaagggcgcgtggccggcacgcgcc
ctcaggccgcgcgccgcttacgggctggaccctaacaaagagctgagcgatagcctgagg
gactggatgtgccagcgagccgccgagtcgccgagcctgtacgacatggacctgctggac
tgtccgaacaccaagcggcccaacaacgactcgggccaagtgccgatgggcgagggctgg
ggctgggacgtgccacagatctcgaacaacggcaccatgatcctgcccgggtttggggcc
ccctttaaccaaatcatcaacatcctagggcgcatgtgcgaacagccgcagcagaccaag
acgagcaccacgatcagggcgcagacgacgcagccttcccggcccacggagaagccatta
gcgaggcccgacgccaaccagaacgagatcaagtgcttcggtagcgggcacaagatgggc
aacacgcggctgcggctgggcatcgagtcgttctgcagcaacatcggctccgacgccctt
ggcgtcggcgcccgcggcctcaatgacaggagggccgccacaggggagctcacgggcggc
tacaagagacgggacaccaagaccctcgataagaatgacaagatcagcttcagcttcgag
gtgatggatggctgtgcgtggacgttcgacctcgacgagtgcgcgcggtacttcaagacg
gccgtcgacagctgcaactgcgacggagagaatgggaagcagggcggctatggggggaac
aattgtctcaagtggatgaccgacccagaatacaagttgtag
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