Chitinophaga agri: GWR21_15505
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Entry
GWR21_15505 CDS
T06416
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chih
Chitinophaga agri
Pathway
chih02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GWR21_15505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chih03021
]
GWR21_15505
Transcription machinery [BR:
chih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GWR21_15505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
UPF0122
HTH_23
HTH_Mga
Lipocalin_2
HrcA_DNA-bdg
Motif
Other DBs
NCBI-ProteinID:
QHS60949
UniProt:
A0A6B9ZGS0
LinkDB
All DBs
Position
complement(3907064..3907579)
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AA seq
171 aa
AA seq
DB search
MLDRQTFEDIFREHHAACLAFAVHYTGNVHEAEEVVQQVFLRLWEKRAFIDITGATRSYL
LAAIRNTAISNWRKETVRQEKEQAAGHMQAADMPVQSPVWELEKRYQQALELLPDRCREV
FVLSRQQQLKYHEIAEVMNISVKTVENQMGKALKIMHKELRDYLHLLLLLL
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgctggaccgccaaacatttgaagatatctttagagaacatcacgccgcttgtctcgct
tttgccgtgcactacactgggaatgtgcatgaggcggaagaggtagtgcaacaggtattt
cttcggctgtgggagaaacgggccttcatagatatcacaggtgctacccggtcatacctg
ctggctgcgatccggaatacagctatcagcaactggaggaaagagacggtcagacaggaa
aaagagcaggccgctggtcatatgcaggctgccgatatgccggtacaatcaccggtgtgg
gaactggaaaaacggtatcagcaggcgctggaactacttcctgaccgttgccgtgaagtg
tttgtactcagccggcagcagcaactgaaatatcatgaaattgcggaagtgatgaatatc
tcagtgaaaactgtagagaatcagatgggtaaggcattgaagatcatgcataaagaactc
agggactatctgcatctgctattattgttgttgtag
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