KEGG   Chitinophaga agri: GWR21_15505
Entry
GWR21_15505       CDS       T06416                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
chih  Chitinophaga agri
Pathway
chih02020  Two-component system
Brite
KEGG Orthology (KO) [BR:chih00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GWR21_15505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chih03021]
    GWR21_15505
Transcription machinery [BR:chih03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GWR21_15505
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF GerE UPF0122 HTH_23 HTH_Mga Lipocalin_2 HrcA_DNA-bdg
Other DBs
NCBI-ProteinID: QHS60949
UniProt: A0A6B9ZGS0
LinkDB
Position
complement(3907064..3907579)
AA seq 171 aa
MLDRQTFEDIFREHHAACLAFAVHYTGNVHEAEEVVQQVFLRLWEKRAFIDITGATRSYL
LAAIRNTAISNWRKETVRQEKEQAAGHMQAADMPVQSPVWELEKRYQQALELLPDRCREV
FVLSRQQQLKYHEIAEVMNISVKTVENQMGKALKIMHKELRDYLHLLLLLL
NT seq 516 nt   +upstreamnt  +downstreamnt
atgctggaccgccaaacatttgaagatatctttagagaacatcacgccgcttgtctcgct
tttgccgtgcactacactgggaatgtgcatgaggcggaagaggtagtgcaacaggtattt
cttcggctgtgggagaaacgggccttcatagatatcacaggtgctacccggtcatacctg
ctggctgcgatccggaatacagctatcagcaactggaggaaagagacggtcagacaggaa
aaagagcaggccgctggtcatatgcaggctgccgatatgccggtacaatcaccggtgtgg
gaactggaaaaacggtatcagcaggcgctggaactacttcctgaccgttgccgtgaagtg
tttgtactcagccggcagcagcaactgaaatatcatgaaattgcggaagtgatgaatatc
tcagtgaaaactgtagagaatcagatgggtaaggcattgaagatcatgcataaagaactc
agggactatctgcatctgctattattgttgttgtag

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