Chitinophaga agri: GWR21_15890
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Entry
GWR21_15890 CDS
T06416
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
chih
Chitinophaga agri
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chih02000
]
GWR21_15890
Transporters [BR:
chih02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GWR21_15890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Prismane
Motif
Other DBs
NCBI-ProteinID:
QHS61024
UniProt:
A0A6B9ZI60
LinkDB
All DBs
Position
4009451..4010965
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AA seq
504 aa
AA seq
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MKQLIKNITLSLAGISLLAACNKKLDIVPEGAPTTGNFWQTQTDAVAGANAMYSMFDDEN
FYGRGYWWFINASDDMVTGRVKAEGDNIKNFNSSFIGGSYTEGQWKQRYIVIKRANDVIL
NVPAIQMDEKLKNRILGEAYFLSGLMYFELAYTYGDARAGVPIVKRDSLTGAKPIPRTAN
VNMVYDYVEQELKKAASLLPYFNEYGSDDYGRPHKTAAFAFLSKMFLYKKDYANAERYAD
SVILSGKHKLLDKFEDVFTISNNWTSEYIWSVYSNSKGPGGWGSILPGVMLENKGWGKYN
GWGYYMPTKELYDSYEAGDLRREATILKPGDHFTFYGEDRTYASTNSLSGYQFRKYMEPF
SYPNGQHLSPNGDHPTTDLNLPLLRYAEVLLIKAEAELQQGKNADKEINLIRHRAGLKDV
TNADMTELKKQRRSELAGEWANRHFDMVRWGDAQAAYAKPLHGFDGSVVWPARSFDPAKH
NVWPVPRSEVISSGGVVKQNGGWE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaactcataaaaaatataaccctttccctggccggtatctccctgctggcggca
tgtaataaaaagctggacatcgttccggaaggtgcgcctaccaccggtaacttctggcaa
acacaaactgacgctgttgccggcgccaacgccatgtacagcatgtttgacgatgaaaac
ttctatggccgtggctactggtggtttatcaacgccagcgatgatatggtcactggtcgt
gtaaaagcagaaggtgataacatcaagaacttcaacagcagctttatcggcggttcctat
accgaaggacaatggaaacaacgttacatcgtgatcaaacgtgcgaacgatgtgatcctg
aacgtaccggctatccagatggacgagaaactgaagaaccgcatcctgggtgaagcgtac
ttcctcagtggcctgatgtactttgagctcgcatatacttacggtgatgcccgtgccggc
gtacctatcgtaaagcgcgacagcctgaccggtgccaagcctataccacgtactgccaat
gttaacatggtatatgattatgtagagcaggaactgaaaaaagcggcgtctttactgcct
tatttcaatgaatatggttcagatgattatggtcgcccgcataaaacagctgcattcgcc
ttcttaagcaaaatgttcctgtacaagaaggattatgcgaatgctgaaagatatgctgac
tctgtgatcctgagcggcaaacataaactgctggacaagtttgaagatgtatttaccatc
tccaacaactggacaagcgagtatatctggtctgtttattctaattccaaaggcccaggt
ggctggggaagcatcctgccaggtgtaatgctggaaaacaaaggatggggtaaatacaat
ggctggggatattatatgcctaccaaagagttgtatgactcctatgaagcaggtgacctg
agaagagaggctactatcctgaaaccaggcgatcattttactttctatggtgaagatcgt
acctatgcgtctaccaacagtttatcaggctatcagttccgtaaatacatggaaccattc
tcttatcctaacggtcagcacctgagccctaacggcgaccatcctacgaccgacctgaac
ctgccactgctgcgttacgcagaagtactgctgatcaaagcagaagcagaactgcaacag
ggtaagaatgctgataaggagattaacctgatcagacaccgtgctggcttgaaagatgtc
accaatgcagatatgaccgaactgaaaaaacaacgtcgctccgagctggccggcgaatgg
gctaaccgccacttcgacatggtacgctggggtgatgcacaggctgcttatgctaaacca
ctgcacggctttgacggctccgtagtatggcctgcacgtagcttcgatcctgccaaacac
aatgtatggccggtaccaagaagtgaagtgatcagcagcggcggcgtggttaaacagaac
ggcggctgggaataa
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