Chitinophaga agri: GWR21_30275
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Entry
GWR21_30275 CDS
T06416
Name
(GenBank) PKD domain-containing protein
Organism
chih
Chitinophaga agri
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_7
PKD_4
PKD
CHU_C
Motif
Other DBs
NCBI-ProteinID:
QHS63714
UniProt:
A0A6B9ZQ63
LinkDB
All DBs
Position
complement(7718509..7723395)
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AA seq
1628 aa
AA seq
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MRLFAPTCRLSHNCVNLFILFNVFFLCSLYTFGQAPTITSFTPGNVCQGTAITITGTNFT
GATAVSIGSANAAGFTVTSPTTITAVVSTSASTGGITVTTPDGTATATGNLTIRPIPRPE
LQDVGTKDAEFSNCDGSLSYTLRVANSSLTPEPNSTYSINWGDGSPAFTPGTWPANAEVS
HTYNSQGYFPVTITITPPNGCTQTRTYQFYNGKNPLASFSTSTSTTGLCVPAPIEFQIGN
WFNNTPGTTYEIDFGDRTPPLVLQHPLNPTQTTHLVTHTYSVSSCPAVDFTATLKVSNGC
FTTTYTLDQIIIRKKPVADFSTPQALCINTPVCFTNLTEDGYGGTSCNRNTNFLWEFGDG
TTSTNRTPACHTFPGAGTYTVKLTATNNACGDDVKTRQIVIRDVSPPPTVAAAPVTYCED
QSAVPLTATGTNLLWYSFSSGGTGAVTPPTPATNRPGTFTYYVTQTLPDHCESPRAAITV
IVHPLPQPPTVNSPVGLCRTQAATPLTATGTGLLWYTSASGGTGSSAAPTPVTTSPGAFT
WYVSQTVNGCEGPRAAINVIVSELAGPPTVTSPVNYCQYQQASALSANGTGLLWYAAANG
GTGSNTPPIPSTATAGSTTYYVSQVTGCGESQRAAIEVNVTASPTATIAYSRSVLCNVVN
SATTPNPPVSVTRTGAGGGSYTISPSTGLSVDATTGTLTPSGAQAGTYTIRYTIPGTAPC
PDYVTSTTVTVSSTPSATISYPALCSADGVTSVRLTGDAGGTFSSATGLAINAATGAITP
GSSTPGTYIVTYTIAPSPPCAGFTTSTQVTLTQAPTAAITYQPAVLCNMPNTTGTPNLPV
TPTRTGVSGGTYTISPAGGLPIDATTGTLTPAGAVAGTYTITYTVAGTGGCAQYRTTTTV
TVNSTPAATISYAGSPYCGSNAMPQPVTFSGTRGGTFSAGTGLSVNATTGEIDPSRSTPG
QYTVQYIIAPSAPCPGYTATAAVTVNEAPVISFPLAAQAICSGSTASFRPTSTVNNTTYN
WTVMSALPTGVAGVSSGTANGVSPSISLSFTNTGTTNQVLTIRVTPVNPAAVPCSGAPYD
LNLTVKPVTAAPVTDTAKFCMGMPSASLWVTPAPGNTINWYDNDQQPLATPPVITTGIAA
TYRYYVSQTNAEGCESPKAPVVAIVYPTLQITSATASNPSRCGVPSGSIDLHVLDLNNAA
VPDMPVTVHYNKFQLPYTYETRTDASGNITVPLTAGTYSQIYVETAGSCMAQKIPDVFVL
KDPSPPAQPVAGYNPPLCAGATLTLTALSATSEANGPVEYVWAGPAFGTFADTSRNTVVS
FPGVTTTDAGTYVVYAMQNNCISLPAEIEVKILAGPSLPVISTRSPLCVGDDLVLQAFSS
IPGNTSLNYLWKGPGPGLPVNTPAVTINDVQVTHAGIYTVTVTSSETGCAASADTMIQVG
AYPVVTLPQDTVSLPTGYLFPLTTTISNANAPGVSPVTQYTWTPAQDLRCNDALCSAPVA
TIKNDICYQVEVTNAFGCKARDQICIRVFCQESQVFIPNAFAPTGEIPENRRLIVRATGI
NSIKSFRIFNRWGKVLFERSNFPPNNTSFGWDGRVNGKPADTGVYIYTVDVICENGVPYT
FKGNVTLF
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgcgattatttgcccctacatgtcgtttatcccacaactgcgtaaacttatttatttta
tttaatgtctttttcctttgctcgctgtataccttcggacaagcaccaacgatcaccagc
tttacaccggggaatgtatgccagggaacagccattaccattaccggcaccaacttcacc
ggggcaaccgctgtcagtataggtagcgccaatgcagcgggtttcaccgttaccagtccg
acgactattacggcagttgtctccaccagtgcatcgacaggcggcatcactgttacgacg
cctgatggtactgccaccgccacaggcaacctgaccatcaggcccattccccgaccggaa
ctacaggacgtcggtacaaaagacgctgaattctccaactgtgacggcagcttatcttat
accctgcgtgtagcgaatagctcacttacgccggaacccaatagtacttacagcatcaac
tggggagatggatcacctgcatttacaccaggtacctggccggcaaacgcagaagtaagt
catacctataactcacaggggtatttcccggtgacgatcacgatcacgcctcccaatggc
tgtacacaaaccaggacataccagttctacaatggaaagaacccactcgcaagcttcagt
acatctacctctaccaccggactatgcgtaccagcgccgatagaattccagataggtaac
tggttcaataacacccctggtaccacttacgaaattgacttcggtgaccgcaccccgccc
ctcgtattacaacatccgctcaatcccacccaaacaacgcatctcgttacacatacctac
agcgtctcttcatgtccggcagtggactttactgccacactaaaagtgagcaacggttgt
tttaccaccacctatacactcgaccagatcatcatccggaaaaagccggtggccgatttc
agtacgccgcaggcgctttgtatcaatacgcccgtctgcttcaccaacctgacagaggat
ggatatggtggtaccagctgtaacaggaatacgaacttcctatgggagttcggagatggc
actacgtctacaaacagaactcctgcctgtcacacatttcccggtgcaggtacctacact
gttaaactgaccgctaccaataacgcctgcggggatgatgtaaaaaccaggcagatcgtg
atacgggatgtctcccctccgcctacggtagcagcggccccggtcacctattgtgaagac
cagtctgcagtaccattgaccgccacaggcaccaacctgttatggtatagcttttccagc
ggcggcacaggcgccgttacaccgcctacaccagcgaccaaccggccaggcactttcacc
tattacgtcacacagacactacctgatcattgtgaaagtccgagagccgccatcactgtc
atcgtccatccactgccgcaaccacccaccgtcaattcccctgtagggctttgccgtact
caggcggccaccccattaaccgcgacaggcacaggattgctttggtatacttctgccagc
ggcggcacagggtcttctgccgcacccacaccggtaaccaccagcccaggtgccttcacc
tggtatgtgagtcagacggtcaacggctgtgaaggtcccagggcagcgatcaacgttatt
gtcagtgaactggcaggcccaccaacggtaacctcgcctgtcaattattgccagtaccag
caggccagtgccctgtcagcaaacggcaccggactattatggtacgctgccgcgaatggt
ggcaccggctccaatacaccgcctataccgtctaccgctactgccggcagcaccacctac
tatgtcagccaggtaacaggctgcggtgaaagtcagcgggcagccatagaggtcaatgtg
acggccagtcctactgcaaccatcgcctatagccggtctgtattatgtaacgtggtcaat
tcggcaacaacacctaatccaccggtaagtgttaccagaacaggtgccggaggtggcagc
tatacgatctctccatccaccggcctttctgtagatgctaccaccggtacgctcacacct
tcaggcgcacaagccggtacatataccattcgctataccataccgggtacggcaccttgt
ccggactacgtgaccagtaccactgtcactgtcagcagtacgccttcggcgacgatcagt
tatccggcactatgttctgcggatggtgttaccagtgtacgcctgaccggcgacgccggc
ggtaccttctcttccgctactggtctggccatcaatgccgccaccggcgctatcacacct
ggcagcagtacaccaggtacctatatagtgacctacaccattgcgccatcgcccccctgc
gcgggtttcacgaccagcacacaggtaaccctcacacaggcgcctactgctgctattacc
tatcaacctgccgtattatgtaatatgcccaacacaacaggcacacctaatctgccggta
acgcccacgcgtaccggtgtatccggaggtacctatactatcagccccgccggtggcctg
cctattgatgcaacaacgggcacacttacgccagcgggcgctgtcgccggcacatatacc
attacctacaccgtagctggcaccggcggctgtgcgcagtatcgtaccacaacgaccgta
acggtcaacagtacccctgcagccaccatcagttatgccgggtcaccttattgcggtagt
aacgcaatgccacagccggtcaccttttctggtacacgaggtggcaccttcagtgccggt
accggactgtctgtcaacgcaactaccggagagatcgatccgtcgcgcagcacacccggc
caatacaccgtgcaatacatcatcgcaccgtcagcaccttgcccgggttatacggctact
gcggcagtgactgtcaatgaggcaccggtcatctcattcccgcttgcggcacaggcgatc
tgttcgggtagtacagcctccttccggccaacatccacggtcaataacactacctacaac
tggacggttatgagcgcacttcctaccggtgtggccggcgtcagctcgggtactgccaat
ggtgtcagcccgtcgatatcactttcgtttaccaataccggcactaccaaccaggtactc
accatccgtgtcactcctgtgaatccggcggcagttccctgttccggtgcgccctacgat
ctgaacctcaccgtcaaacctgtcacagctgcacctgtaacagacaccgccaagttctgt
atgggcatgccttccgcttccctatgggtaacgccagcgccgggaaatacgatcaactgg
tatgacaatgatcagcagccgctcgccacccctccggtgatcactacaggtattgctgct
acttaccgctactatgtcagtcagaccaacgctgaaggatgtgagagtccgaaagcaccg
gtggtcgccatcgtatatccgaccctgcaaatcaccagtgccactgccagcaacccttcc
agatgtggcgtaccttccggtagtatcgacctgcatgtactcgacctgaataacgctgcg
gtaccggatatgccggtcaccgtacactataataagttccagttgccctacacatatgag
acgcggacagatgcatccggtaacatcaccgtaccactgaccgccgggacctattcgcag
atatatgtggagaccgcgggtagttgtatggcacaaaagatccccgatgtctttgtattg
aaagacccttcgccaccggcgcaaccagtagcgggttataatccgccgttgtgtgcaggc
gcaacgctgacgttaacggccctctctgctaccagtgaagcgaacggccctgtcgaatac
gtatgggcaggtcctgcattcggcaccttcgctgataccagccggaacactgtggtgagt
ttcccgggcgtcaccactacagatgcaggtacttacgttgtgtatgcgatgcagaacaac
tgtatctccctgccggctgaaattgaagtaaagatcttagcaggtccttccctgccggtt
atttcaacgagatcgcctttatgtgtgggtgatgacctggtattacaggcgttcagttcc
attcccgggaatacatcattgaattacctgtggaagggccccggtccgggattaccggtt
aatacacctgccgtaacgatcaatgatgtacaggtcactcatgccggtatctatacggtg
acagtcacttcatcagaaacgggttgcgccgcatctgccgatacgatgatacaggtaggt
gcttatccggttgtcaccttaccacaggatacagtgagcctgcctacagggtatctgttc
ccactcaccactacgatcagcaatgccaatgcgccaggtgtgtcaccggtcacgcaatat
acctggacacctgcacaggacctgcggtgcaatgacgcactatgcagcgcgcctgttgcc
actattaaaaacgatatatgctaccaggtggaagtaacgaatgcctttggctgtaaagcg
cgtgatcagatctgtataagggtgttctgtcaggagtcgcaggtctttattccaaatgcc
tttgcgcctaccggagagatcccggagaacagaaggctgatcgtcagagctaccggtatc
aacagcatcaaatcattccggatattcaaccgctgggggaaggtattgtttgaacggagc
aatttcccaccgaacaataccagtttcggctgggacggacgtgtcaatggtaaaccggct
gatacaggcgtatacatctatacggtagatgtgatctgcgaaaacggtgtgccttacacc
tttaagggaaatgttactttattctaa
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