Chitinophaga sp. XS-30: FW415_01020
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Entry
FW415_01020 CDS
T06207
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
Organism
chit
Chitinophaga sp. XS-30
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
CarboxypepD_reg
CooC_C
Motif
Other DBs
NCBI-ProteinID:
QEH43911
UniProt:
A0A5B9WVC9
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Position
complement(246570..249776)
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AA seq
1068 aa
AA seq
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MTAAKTVWKHPDASTPENKRTGNLVIPSRHYEDIVVRGKVTDENGDPLIGVNIKAKNSNK
GAVTDKDGNYMLTLPSSGAVLIFSFLGYIPREITIDKTQVFDLQLTPDPKALDEVVVTAL
GIKREEKALGYATTVVKGEQLTDALSSNWTDALSGKVAGLNMLRSNAGPTGSNKIILRGE
NNLTGDNEALIVVDGIVINQGSARRTGNGGEATYGTGSDNMPADYGSGMNDINPEDIETI
TVLKGPGAAALYGQRGANGAIIITTKSGSSKRKGLGVTINSNASIEEVNRWPDLQFEYGQ
GLDGAAYYSYGAGPDGSSTSGTSSAYGPRFDGQMFYQYDPKLQAVGTERTPWVPYKNKVN
NYFETGETFTNTISVDGGTDKTTARFSLTNVQNNWIMPNTGYKRNTVSMSVNSKVNDKLR
ITSKVNYTNKSSDNLPGSGYGNQSIMYWYIFWQPNADLDWLRNYWVNGQEGRKIKYPYST
FPENPYAIAYEFLNESNRHGITGNIQATYDLTKELSLMVRTSVDMTYEQRAQKRPYDAGS
KLQKGSFRTQNIFSMEASSDFLLKYAKKINSDFDISITGGGSILRNTYNRDENRADSLTY
PGLYIMTNAAGPLETRPYRSRYAINSFYGLISAGYKDFLFMDLTARQDWNSALATPARTD
NAGFFYPSANLSFIASEVLSLPKSINFAKLRLSLSSVGSGGVIPYRTAYNYATAGSLYDG
GLQTPSLLANPNLRPLRTFTFETGLAMKMLKNRLGFDLAVYSGKTRDQHLDRVLDRASGF
TRILINAGEVSNQGLELALNGTPVKSKNFTWNMNAVFSVNRNRIEDLTDSTLVLQTGPVG
GGQIVAKVGGSMGDLYGRGYVRAPDGQVVYDANTGVALISQDVTYLGNTIPKGRVGFTNE
FRYKQFRLSLQFDAQYGAVGHSLTHYKMAEQGKLTKTLPGRYNGIIGNGVIQDADGKYVQ
NNVIATDIDEYYRSHFGVDNAEGSTFSTDFIKFREARIDYSLNSAVVKRLGLQRFTVGVY
GRNLHIWSEWPMFDPEFGTLSGSDIVKGFEIAQFPSTRTLGVNLVVGF
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgcaaaaacggtatggaagcacccggatgcttcaacacctgaaaacaaaaga
acagggaacctggtaataccctcccgccattatgaagatattgtggtaaggggcaaggtg
accgatgaaaacggcgatccgctgatcggtgtgaacatcaaagcgaagaacagcaacaag
ggcgccgtcactgataaagacgggaattatatgctcacgctcccttcctccggcgccgta
ctgatattttctttcctgggttatattccccgtgaaataacgattgacaaaacgcaggtt
tttgacctgcagctcactcccgacccgaaagcgctggacgaagtggtggtaacggcactt
ggtatcaaacgcgaggaaaaagcattgggatacgcgactaccgtagtaaaaggcgaacag
ctgactgacgctctttccagcaactggacggatgccctctcgggaaaagtggccggcctc
aatatgctgcggtcaaatgcaggccccaccggctccaacaagatcatcctgcgtggggag
aacaacctcacgggtgacaatgaagcgctgatcgtggtggatggaatcgttattaatcag
ggtagcgcccgccgcacaggcaacgggggcgaagccacttacggtaccggcagtgataac
atgccggctgactacggcagtggtatgaatgatatcaacccggaagatattgaaaccata
acggtgctgaaaggccctggggccgccgcattatatggccaacgtggtgcgaacggcgcg
atcatcattaccacaaaatccggcagttccaaaaggaaaggccttggcgtgaccatcaat
tccaatgcttcaatagaagaagtgaaccgctggcctgaccttcagttcgaatacggtcag
gggctggatggcgcagcctattattcctatggtgctggtccggatggcagcagcaccagc
ggtaccagctccgcttatggccccaggtttgatggccagatgttctatcagtacgatcct
aagttacaggcagtaggtacggaaagaacgccctgggtaccctacaaaaacaaggtcaat
aattattttgaaacgggggaaacctttaccaataccatcagcgttgatggcggtacagac
aagaccactgcacgtttttccctgaccaatgtgcagaataactggatcatgcccaataca
gggtataaacgcaacaccgtttccatgtccgtcaattcaaaagtgaatgacaaacttcgg
atcacttccaaagtgaactataccaataaatcgagcgataacctgccgggttccggttat
ggcaaccagtctatcatgtactggtatattttctggcagcccaatgcggatctcgactgg
ctgaggaactattgggtaaacgggcaggaaggccgcaagatcaaatatccctacagcacc
ttcccggaaaacccttacgccatcgcctacgaattcctcaatgaatctaaccgtcacggc
ataacaggcaatattcaggcaacctacgatcttacaaaggaattaagcctgatggtgagg
acttccgtcgatatgacctatgagcagcgtgcccagaagcgtccctacgatgcaggctcc
aagctgcagaaaggaagcttccgtacacagaacatttttagtatggaagccagcagcgac
ttcctgctgaaatacgcgaaaaagatcaacagcgatttcgatatttcgattaccggtggt
ggtagcatattgcggaatacctacaacagggatgagaaccgtgcggactcgctgacctat
cccggtctgtacatcatgaccaacgccgccgggccgctggagaccagaccttacagaagc
aggtatgccatcaatagcttctacgggctgatttccgcagggtataaagacttcctgttt
atggatcttaccgcccgccaggactggaacagtgcattggcgacacctgcccgtactgac
aatgcagggttcttctatccctctgccaatctgagtttcattgcatcagaagtgctgagc
ctccccaagtccataaactttgccaaactcaggttatctctgtcaagcgtgggcagcggt
ggtgttataccctatcgtaccgcctataactacgctactgctgggagcctgtatgatggt
gggttacagaccccatccctactggcaaacccgaatcttcgcccgctccggaccttcact
tttgaaacaggcctggcgatgaaaatgctcaaaaaccgcctgggctttgacctggctgta
tatagtggcaaaacaagggatcagcacctggatcgtgtacttgatcgtgcttcagggttt
acccggattctgatcaacgccggtgaagtgagcaaccaggggcttgaactggcgctgaac
ggtacaccggtaaagagcaagaacttcacctggaatatgaacgccgtgttctctgtgaat
cgtaacaggatagaagacctgacagacagtacgcttgtgctgcaaacaggccccgttggc
ggcggccagatcgtggcgaaagtaggcggaagcatgggcgacctctacggcagagggtat
gtaagagccccggacggacaagtggtatatgatgccaacaccggtgttgcccttatctca
caggatgttacctatttgggtaataccattcccaaaggacgggttggctttaccaatgaa
ttccgctacaagcaattccgcctgagcctgcagttcgatgcccagtatggtgcagtagga
cattcgctgacgcactataaaatggcggaacagggcaagcttaccaaaacactgcccggg
cgatacaacggcatcataggtaatggcgtgatccaggacgcagacgggaaatatgtacag
aataatgtgatcgccaccgatattgacgaatattaccgttctcattttggtgtagataat
gcggaaggcagcaccttcagcactgatttcatcaagttcagagaagcgcgtattgattat
tccctcaattctgctgttgttaaaagactgggtttacagcgtttcacagttggtgtatat
ggccgtaatctccacatctggtcggaatggcccatgttcgatcccgaattcggaacgctc
agcggttcggatatcgtgaaaggcttcgaaatcgcgcagttcccatccacccgtacgctc
ggagtaaacctggttgttggattctaa
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