Cardiobacterium hominis: NCTC10426_01658
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Entry
NCTC10426_01658 CDS
T05791
Name
(GenBank) membrane-bound lytic transglycosylase F
Organism
chj
Cardiobacterium hominis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
SLT
Cadherin_pro
Beta_helix
SCAB-Ig
Trypan_PARP
He_PIG
Motif
Other DBs
NCBI-ProteinID:
VEG77604
LinkDB
All DBs
Position
1:1745174..1751467
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AA seq
2097 aa
AA seq
DB search
MNRSIALEIHDTAGNTIAQYHLESAGGAQHIDAVSGAYYQFTDLTTGLGPEGLSTARAGD
DLLVHLDGDKQPELVIENYYSQGQGALVGMQENGGLASYPVASAPEHTLASEIITEQPLG
ADQPALAPLGVLGAVGLVAGSIAFARDHGYKGDSGNNPQPQPNSQPQPNPQPQPNPQPQP
NPQPQPNPQPQPNPQPQPNPQPQPNPQPQPNPQPQPNPQPQPNPQPQPNPQPQPNPQPQP
NPQPQPNPQPQPNPQPQPNPQPQPNPQPNHPPTGKVTITGVAKVGQTLTAANDLQDEDGL
GTITYRWFADNQEIGQGATYQIRAADKGKTLTVKAEYTDGKGHAEIVESAKTAPVSEDNT
PQPPQNHAPTDIALSASDIAEGKDGASVGKLTTTDPDAGDTHTYKVSDDRFEVAADGTLK
LKAGQHLDYAAEKTINLTVTATDAGGLSTQKTFTLQVQDDPNYLTPQPQPPQNHAPTDIA
LSESQIAEGKDGATVGKLTTTDPDAGDRHTYTVNDSRFEVASDGTLKLKAGQHLDYATEK
TVALTVTATDAGGLSTQKTFTLSVQDDPNYPTPQPQPPQNHAPTDIALSASNIAEGKDGA
TVGKLTTTDPDTGDRHTYTVSDSRFEVASDGTLKLKAGQHLDYASEKTVNLTVTATDAGG
LSTQKTFTLSVQDDPNYPTPQPQPQPNRLGTVEISGVAKVGETLLATVSDADGVPNDVAY
KWFADGQEIAGAAAATFKLTNAEKDKSITVQALYTDARGTAEQPLSAATDKVADTTAPGA
NGAGKVAIAGTAKVGQTLTAAVTDPDGVPDKVEYQWFADGAAIRGATGSSYILTDAEKYK
VISVSARYTDLAGHAESVKGDIAPGDINTSISPDFLARQAQYKDLINSVAHKYDIDKALI
HAIISVESAYRQEHVAPTNGAVGLMQLAPATAQMLGVNPHNAAENVDGGVRYFKTQLDRF
HDVNLALAAYYDGPQTVEKHGNQVPPFASTKRYLDRVHGYQDIYQNERPELINDLGTLRV
SGEAKIGANLAAEISDYDGVDPAKVQYQWQRDGKAIDGATGKTYPLQAADAGKTITLHAE
YQDGRGVKETLDSSAITPPPANNHAPTGSVIISGTAKVGQTLTASNDLQDADGIGAITYR
WFADGTEIGQGATYQIRAADKGKSITVKAEYTDGQAHAESVASQPTAAVSEDAPNQPGSV
NITGEAKIGGILTAQVADGDGVDPAQVQYQWQRDGQPIDGATAKTYQLTAADAGHKISVQ
ATYDDQAAHHETPTSPASDIAAADPHAGAITVSGAAKVGAVLTTAITDADGVPKTGIHYQ
WYADGKAIDGATHEVYRIRPDDIGKHISVQANYTDNGGHAETTNTAAVAQNVADNPATQS
AHGHKLYAHEEFGKYIDARDFGVNPANADNTAALKAALKAADDEGAALYLGAGTLKLHEQ
IRIGADVHDKSGKLIQEGYENVRAIFGAGAGETHLTFDWQQTEGERFYPRAKDDRFNPWN
NRTNVNPYAAILIDGVNGKSVADLSLEYQHKTAEDFYQKTKSYFGLINGIIVNDADHTKI
DTVEISGMNRAGVYFTSTLAESSGARDKLKTHQISEADAPTGDNNQLIYSNLHHNRVAGA
LVAFQKNFTADSNHLAWNGHEADGGTGYGIASMAGSYGFGITYSRNTTDHNYRKGLDIHD
GNHITIENNTLNGDRLYGIGVYNRQFTMDDVTIRNNHITADPKFRLATDDGDEIAGGTPN
YHLYSGIQIQTNTQPLIQDLQSKGPGKFDISDNTISGLEIYQNGVQTYGIEFRNHEPTMN
YALNIRGNHISGESSKYLIGILNQTQHKNGSVGAGSGDITIENNTMELARSGRDTAPIYL
EEKGQISTLRGSVKINHNALTLREASEGATEAIAMHGNAKTYDVGHNTFELHGNVHDRPV
VRINGSSSSAKPHLNLHDNTFQTEDHFDASWLKYGNASVETHNNTLNGKALVTAGSPYQH
ETPQLLHDHDGYHLNAETALHYPLPAAQPAKHAPYDSLETDKLHELLETHGNEHHAAPAH
APYDSLEANKLHELLGAHGGANHEHGATAKTAAPHYDATHQHNPVPHLPQEDPYTIL
NT seq
6294 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgctccatcgcccttgaaatccatgacaccgctggcaacaccatcgcccaatac
catctcgaaagcgcgggcggtgcgcaacacattgatgcggttagtggtgcctactatcag
ttcactgatctgactacggggcttggcccggaaggcctctcgactgcgcgcgcgggcgat
gacttgctcgtccaccttgatggcgacaagcaacccgagcttgtcatcgaaaattactac
agccagggacagggcgcgctggtcggcatgcaagaaaacggcgggcttgccagttatccg
gttgccagcgcgccggagcatacgctcgccagcgaaatcattaccgagcagccgctgggc
gctgatcagccagcgcttgccccgctcggcgtgttgggcgcggtcggtctggtcgccggt
agcatcgccttcgcccgcgaccacggttacaagggtgatagcggtaataacccgcagcca
cagccaaactcgcaaccgcagccgaatccgcaaccgcagccgaatccacaaccacagccg
aatccgcaaccgcagccaaatccgcaaccgcagccaaatccgcaaccgcagccgaacccg
caaccacagccgaatccgcagccgcagccaaatccgcaaccacagccaaatccgcaacca
cagccaaatccgcaaccacagccaaatccgcaaccacagccaaatccgcaaccacagcca
aacccgcaaccgcagccaaacccgcaaccgcagccaaacccgcaaccgcagccaaacccg
caaccgcagccaaacccgcaaccgaatcatccgccgacgggcaaagttaccattacaggt
gtggcgaaagtcgggcagacgctcactgccgcgaacgatctccaagacgaagacggcctt
ggcaccattacctatcgctggtttgcggataaccaagaaatagggcagggcgccacttac
caaatccgtgccgctgacaaaggcaaaaccctcaccgtcaaagccgaatacaccgatggc
aaagggcacgcggaaatagtggaaagtgcgaaaaccgcgccagtaagcgaagacaatacg
ccgcagccgccgcaaaaccacgcgccgaccgatattgcgctttccgcaagtgatattgcc
gagggcaaagacggcgcgagcgtgggcaaactgaccaccaccgaccccgatgcgggcgac
acgcacacttataaagtcagcgacgaccgctttgaagtcgccgccgatggcacgttgaag
ctgaaagcagggcagcatctcgactacgcggcggaaaaaaccatcaaccttaccgtcacc
gcgaccgacgcgggtgggctctccacgcaaaaaacgttcaccctgcaagtgcaggacgac
ccgaattacctaacgccgcagccgcaaccgccgcagaatcacgcgccgacggacattgcc
ctttctgaaagccaaatcgccgagggcaaagacggcgcgaccgtgggcaaactgaccacc
accgaccccgacgcgggcgaccgccacacgtataccgtcaacgacagccgctttgaagta
gcgagcgacggcacgctgaagctgaaagcggggcagcatcttgactatgcgacggaaaaa
accgtcgcactcaccgtcaccgccaccgacgcgggcggactctccacgcaaaaaaccttt
accttgagcgtacaggacgacccaaattaccccacgccgcaaccgcagccgccgcaaaac
catgcgccgacggacatcgccctttccgcaagcaacatcgccgagggtaaagatggtgcg
actgtgggcaaactgacgacgaccgaccccgacacgggcgaccgccacacgtataccgtc
agcgacagccgttttgaagtggcaagcgacggcacgttgaagctgaaagcggggcagcat
ctcgattacgcgagcgaaaaaaccgtcaaccttaccgtcaccgcgaccgacgcgggcgga
ctctccacgcaaaaaaccttcaccctgagcgttcaggacgacccgaactacccgacgcca
cagccgcaaccgcagccgaatcgactcggcacggtggaaatcagcggcgtggcgaaggtc
ggcgagacgctgctcgcgaccgtcagcgatgccgacggcgtgccgaacgatgtggcgtat
aaatggttcgccgatgggcaggaaattgccggtgccgcggccgcgaccttcaagctgacc
aatgccgagaaagacaagagcatcaccgtacaggcgctttataccgacgcgcgcggcacg
gcagagcagccgttgagcgcagccaccgacaaagtcgctgataccaccgcgccgggcgca
aacggcgcgggcaaagtcgccattgctggcacggcgaaagtcgggcagacgctaacagcc
gcggttaccgacccggatggcgtgccggacaaggtggaatatcaatggtttgccgatggc
gccgccatccgtggcgcgaccggcagcagctacatcctcaccgatgccgagaaatacaaa
gttatcagcgtcagcgcgcgctacaccgacctcgccggacacgcggaaagcgtcaagggc
gacatcgcccccggcgacatcaataccagcatcagcccggacttcctcgcccgtcaggcg
cagtacaaagacctcatcaacagcgtcgcgcacaaatacgacatcgacaaggcgctcatc
cacgccatcatcagcgtagaaagcgcctaccggcaggaacacgtcgccccgaccaacggc
gccgtcggcctgatgcagctcgcgcccgccaccgcccaaatgctcggcgtcaacccgcac
aacgccgcggagaacgtcgatggcggcgtgcgttacttcaaaacacagctcgaccgcttc
cacgacgtcaacctcgcgctcgccgcctactacgacggcccgcaaaccgtagaaaaacac
ggcaaccaggtgccgccgtttgccagcaccaagcgctacctggaccgcgtccacggctat
caggacatctaccagaacgagcgcccggaactcatcaacgacctcggcaccctgcgcgtc
agcggcgaagcgaaaataggcgcgaacctcgccgcggaaatcagcgactacgacggcgtt
gacccggcaaaagtacagtaccaatggcagcgcgacggcaaagccatcgacggcgccacc
ggcaaaacctaccccctgcaagccgccgacgcaggcaaaaccatcaccctgcacgccgaa
taccaagacggccgcggcgtcaaagaaaccctggacagcagcgccatcaccccgccgccc
gcgaacaaccacgcgccgaccggcagcgtcatcatcagcggcacggcaaaagtcggccaa
accctcaccgcctcgaacgacctgcaagacgccgacggcatcggcgccatcacctaccgc
tggtttgccgacggcacagaaatcgggcagggcgcgacctaccaaatccgcgcggcggac
aaaggcaagagcatcaccgtcaaagccgaatacaccgacggccaggcgcacgccgaaagc
gtcgccagccagccgaccgccgccgtcagcgaagacgcgcccaaccagccgggcagcgtc
aacatcaccggtgaagccaaaatcggcggcatactgaccgcgcaagtcgccgacggcgac
ggcgttgacccggcgcaagtccaataccaatggcagcgcgacggccagcccatcgacggc
gcgaccgcaaaaacctaccagctcaccgccgccgacgctggccacaaaatcagcgtacag
gcgacctacgacgaccaagcggcgcaccacgaaaccccgaccagcccggcaagcgacatc
gccgccgccgacccgcacgcgggcgcgataaccgtcagcggcgcggcaaaagtcggcgcg
gtgctgaccaccgccatcaccgatgccgacggcgtgccgaaaaccggcatccattaccaa
tggtatgccgacggcaaagccatcgacggcgccacacacgaggtgtaccgcatccgcccc
gatgacatcggcaagcacatcagcgtgcaggcaaactacaccgacaacggcggccatgca
gaaaccaccaacaccgccgctgttgcgcaaaatgtagccgacaacccggcgacacaaagc
gcacacggccacaaactctacgcgcatgaggagtttggcaaatacatcgacgcgcgcgac
ttcggcgtcaacccggcaaacgccgacaacaccgccgcgctcaaagcggcgctcaaagcg
gcggacgacgaaggcgcggcgctctacctcggcgcgggaaccctcaaactgcacgaacaa
atccgcatcggcgccgacgtacacgacaaaagcggcaaactcatccaggaaggctacgaa
aacgtgcgcgccatcttcggcgcgggtgcgggcgagacccacctcacctttgactggcag
caaaccgaaggcgagcgcttctacccgcgggcgaaagacgaccgcttcaacccctggaac
aaccgtaccaacgtcaacccctatgcggcaatcctgatagacggcgtcaacggcaaaagc
gtggccgacctcagcctcgaataccagcacaaaaccgcggaggacttctaccaaaaaacc
aaaagctacttcggcctgattaacggcatcatcgtcaatgacgccgaccacaccaaaatc
gacaccgtagaaatatcaggcatgaaccgtgccggcgtttacttcacctcaaccctggca
gaaagcagcggcgcgcgcgacaaactgaaaacccaccaaatcagcgaagcggacgctccc
accggcgacaacaaccagctcatctacagcaacctgcaccataaccgcgtggcaggcgcg
ctcgtcgccttccagaaaaacttcaccgctgacagcaaccatctcgcctggaacggccac
gaagccgacggcggcaccggctacggcatcgccagtatggcgggcagctacggctttggc
atcacctacagccgcaacaccaccgaccacaactaccgcaaagggctggacatccacgac
ggcaaccacatcaccatcgaaaacaacaccctaaacggcgaccgcctgtacggcattggc
gtctataaccgccagttcaccatggatgacgtcaccatccgtaacaaccacatcaccgca
gaccccaaattccggcttgccaccgacgacggcgatgaaatagcaggaggcacacccaac
taccacctctacagcggcatacaaatacagaccaacacccagcccctaatccaagacctg
caaagcaaagggccgggcaaattcgacatcagcgacaacaccatcagcggcctcgaaatc
taccagaacggcgtccagacctacggcatcgaattccgcaaccacgagccgacgatgaac
tacgcgctcaacatccgcggcaaccacatcagcggcgaatcgagcaaatatctcatcggc
atcctgaaccagacacagcacaaaaacggcagcgttggcgcaggaagcggcgacatcacc
atcgaaaacaacactatggaactcgcccgcagcggacgcgacaccgcaccgatctacctc
gaagaaaaaggccaaatcagcaccctgcgcggtagcgtcaaaattaaccacaatgcgctc
accctccgcgaagccagcgagggcgccaccgaagccattgccatgcacggcaacgccaaa
acctacgacgtcgggcataacaccttcgaactgcatggcaacgtgcatgaccgcccggtt
gtccgcatcaacggctccagcagcagcgccaaaccgcatctgaacctgcacgacaacacc
ttccagacagaagaccattttgacgcgagctggctcaaatatggcaacgccagcgtcgag
acgcacaacaacaccctaaacggcaaagcgcttgtcaccgctggctcgccctatcaacac
gaaaccccgcaactgctgcacgaccacgacggctaccaccttaacgccgaaaccgcgctg
cattacccgttgcctgcggcgcaacccgccaaacacgccccctacgacagcctggaaaca
gacaaactgcatgagctgctggaaacccacggcaacgaacaccatgcagcccccgcgcac
gcgccctacgacagcctggaagcaaacaaactgcatgagctgctgggagcccacggcggc
gcaaaccacgaacacggcgcgacggcaaaaacagcggccccgcactacgacgcgacccac
caacacaacccggttccacacctgccgcaagaagatccctacaccattctctaa
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