Chryseolinea soli: D4L85_19420
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Entry
D4L85_19420 CDS
T05641
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chk
Chryseolinea soli
Pathway
chk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D4L85_19420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chk03021
]
D4L85_19420
Transcription machinery [BR:
chk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D4L85_19420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
HTH_5
HTH_30
HTH_40
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AYB32613
UniProt:
A0A385SLH6
LinkDB
All DBs
Position
4547513..4548241
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AA seq
242 aa
AA seq
DB search
MLCQRIKSLVNGLSSPQTLPNFEQTIAFIKRYAYTCLKIPGLGWALITAERMQEDYEWSE
QDLIVALQNSDARAYNVIFKQYWKTLYHQAYTKLQSHEIAEEIVQDLFLTLWEKRSTLLI
SNLQHYLKASLRNKCIDHIRARMVKDKYWTYYKTFIPRQTNNTQEMVTYNNLVEALESGM
ARLPEKTKAIFSLSRFEGRSVADVAKDLQLSEKAVEYHLTKSLKVLKVYLKDFVFLFLLF
LL
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgctttgccaaagaataaaatctctggtcaacggcctttccagccctcaaacgttgcca
aattttgaacaaacgattgcatttattaaacgttatgcatacacttgtttgaaaattcca
ggtttaggctgggcacttataaccgcagaacggatgcaggaagactacgaatggagcgag
caggatctgatagtggcattgcaaaatagcgatgcccgggcgtataatgtcatcttcaaa
caatattggaaaacgttatatcaccaggcctacaccaaactgcagtcgcatgagattgcc
gaagagatcgtgcaagatctgttcctcacgctgtgggaaaaacgcagcaccttgttgatc
tccaatttgcagcactacctgaaagcctccctgcgcaacaaatgcatcgaccacatccgc
gcccggatggtgaaagacaaatactggacctactacaaaacgttcatcccacgccaaacc
aacaacacccaggagatggtgacctacaacaacctggtggaagccttggagagtggcatg
gcccgtctccccgaaaaaacaaaagccatcttctccctgagccgcttcgaaggccgctcc
gtcgccgacgtcgccaaagacctccaactctccgaaaaagccgtagaatatcacctcacc
aaatccctcaaagtcctcaaagtctacctaaaagacttcgtcttcctcttcctcctcttt
ctcctctga
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