Cryptosporidium hominis: Chro.30353
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Entry
Chro.30353 CDS
T00210
Name
(RefSeq) hypothetical protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cho
Cryptosporidium hominis
Pathway
cho03022
Basal transcription factors
cho03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cho00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Chro.30353
09124 Replication and repair
03420 Nucleotide excision repair
Chro.30353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cho03021
]
Chro.30353
03400 DNA repair and recombination proteins [BR:
cho03400
]
Chro.30353
Transcription machinery [BR:
cho03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Chro.30353
DNA repair and recombination proteins [BR:
cho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Chro.30353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
Motif
Other DBs
NCBI-GeneID:
3413272
NCBI-ProteinID:
XP_665994
LinkDB
All DBs
Position
3
AA seq
423 aa
AA seq
DB search
MDFAEKLADTSNNSLDEQEVVYSWEQGLIKNWERLVETESGLVVIDDEARFDSNNADESY
NIELLKRAPNTNIRRGLLRNIVIILDMTSNMLELDYKPDRLQCMVKCNEIFIKQLLEDNP
LTQISVISIYDGIGEVIISYNSNFLEIMTSILNYLKKGCKGSMSIQNGLEKAKYLLVSIP
PYGTKEIIFFLGSMRSVDNSFLFNEWVEGFSSNNIIINAILFIPELYIIKTITKMTGGVC
LCAMNNDHLLKLTLENFIKPPPNNIASTPLNINLVTMGFPEYLNNQTHPFGCSCHGSLTH
RGYSCPKCKSIVCYLPTKCPVCLIYLISPNHLAKSFAYLFQHPDIIPIKNGEYSKIESSS
IKTKCELCESQFSNNVYLNSGSRSNIINKYLCTNCNTQFCNECCKFIFTTLHQCPICCSL
RIS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggattttgcagagaaattggcagatacttcaaataactcactggatgagcaagaagtt
gtatattcatgggaacaaggccttataaaaaattgggagagattagttgaaacagagagt
gggcttgttgtaattgatgatgaggctcgctttgattcgaataatgcagacgaaagctat
aatattgagttgttgaaacgtgccccaaatacaaatattaggcgtggcctactcagaaat
attgtaattattttagatatgacttctaatatgctggagctcgattacaagcctgacaga
ctacaatgcatggttaaatgcaatgaaattttcattaagcagctattagaagataatcct
ctaactcaaatctcggttatttctatttacgacggcattggcgaagtaataataagctac
aattctaattttcttgaaattatgacgagcattttgaattacttgaaaaagggatgtaag
ggaagcatgtctattcaaaatgggcttgagaaggctaagtatctgctagtttcaatccct
ccgtatggtacaaaagaaattattttttttctaggaagcatgagaagtgtagataattct
tttttattcaacgaatgggtagaaggtttttcttccaataatattataattaatgcaata
ctcttcatcccagaattatatataattaagacaattacaaagatgacagggggtgtttgt
ttatgcgcaatgaataatgaccacttacttaagttgacccttgaaaatttcatcaaaccg
cctccaaataacattgcgagcaccccattgaacattaacttggttacaatgggatttcct
gaatatttaaataatcaaacgcatcctttcggttgctcatgtcacgggtccttaactcat
cgtgggtattcttgcccgaagtgtaaatcaatcgtttgttacttaccgacaaaatgtccg
gtttgcttgatatatcttatttccccaaatcaccttgcaaaatcattcgcatatttattt
cagcacccagatattattcctattaaaaatggtgaatattcaaagattgagtctagttct
ataaaaacaaagtgcgaattatgtgagagccagttctctaataatgtatatttgaactct
gggtcaagatcgaatataattaacaaatatttatgtacaaattgcaacactcaattctgt
aatgaatgctgcaaatttatatttactactctacatcaatgtccaatttgctgttcattg
agaatttcatag
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