Cryptosporidium hominis: Chro.50172 Help Entry Chro.50172        CDS       T00210                                  Name (RefSeq) DEAD/DEAH box helicase   KO K20103   ATP-dependent RNA helicase DDX60 [EC:5.6.2.7] Organism cho  Cryptosporidium hominis Brite KEGG Orthology (KO) [BR:cho00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cho03019]     Chro.50172 Enzymes [BR:cho01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      Chro.50172 Messenger RNA biogenesis [BR:cho03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Exosome cofactors      Chro.50172 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD ResIII Helicase_C DUF2790 AAA_22 Syntaxin-6_N Motif Other DBs NCBI-GeneID:  3413425 NCBI-ProteinID:  XP_668198 LinkDB All DBs Position 5 AA seq 2123 aa AA seqDB search MDDESLGSCKSFSKHMKDFSAVQNSMKNYGAPSEMVDGSEANFSKDLGILQHFSNNDSIL NEKLNELMGIFKKRESSDSQLAIKESKRMIGEILKWYFGMSHVSLNDITPDISDAENVFV SADGLLINLYYSFGFEVDSNNSPQTLPYIYLFERFMNYLIEAGTKRIILIFLDSFTDVLE KINPGLPLLRESLILHSKLNPEIFNAYHFTSWLSEDFQEFLKELEPSIFLIEDGSSISNL ESLEVKHRHQFIQEVSDENNESIDEYDFEDLDEVDISTSLLSFALEMLSYSNIAIFHKME RKGQRITAFTYSSAIEPRFTEANKGIMRQAAQSKTRDEMRLLSDANEDFVTCDGELDNHL RLKDYEYNIAKEFKSSENDLFTQLVKSLIHNSISEEDLELSKSDDAILHNIKLILLFSKV TLLSGYLRSHKLSYLDRHYISNSMLEFKKCLESKLEQDDFDNEGWEFGATILKSLESLFI SESIKQLRLIINHFEEIKPSINKGQLISNVCDLNDPLLLEFLFYIVGYTSLKEENIRVSL FLEIIGLESSDQSKLEDLWNKISLISEPFFPLSFSGNLNRYVTEDNDKRVLSLFGETVLS REKLSTQRNTSVSNVGLLPINSKFVVRVMSELGVGISDMGQIKGTALESDDKTVSQNEYL NQVIQISGIRDVASWEIDRPQETRPNSKQEYSGGKEGSSVKLPADLEKKRQLRDNQRKQQ FWFNLGQILTGNDKLQQTIVVNPFHVWNKLSAKEADKERNSSGPSSSSKAEEIRRKNEEA KLNKMRQDDENQLKYHEQKLSLILSKGDPDTFMLSVYDMLIGIPRKTNEFGRFRGLSKLF KLPKSRSKILIRTLQTCISVLRSFKSSTLPEVSHMVKARLAVCMTFRLAIETFNQYYSYF DKTDLFEVAKILNSLGFMSSASNLVESYKYKMELDIRRIVDKTSSSNDDSKGKGSDKNKK SQGGKKPTQKKDKKSVSDHSTFPEDTNYSEYQNVYLYAKKHLEELKQSGKSGKSEKIHLC VQDGCESSFQLRYMGADFERSTGSVADPRVPFSPDYWQKQILDIIDSGDSALVCAPTASG KTFICYYAMEQVLRFDNESVVVFIAPTKALADQVHAEIAYRFGSKTYPNHSRISLLCKLS RDYSINIPTQCQILITLPFMLELLLMSTAYQQWVSKIKFVIFDEVHCINEAEGGVYWERI FQLIPCPYLCLSATIGNPLAFYNWLQRIGKLPSSKVHFVTYSERYADLSTLVYDEGNLYP LNPLSSLSYDRVLYYGLPGDFYLPPNDGLDLFLSLKELLKCNSEATKEYLAWLDPQFFFS GTPAITKRQYRFYLSTLLAMTVKLVQNNVLNKEMWLNITGNLLLNPSIRFQRQMVELSKK NDSNLYKIIMGVENIKSLLSGITNSNDEDATEIGSLASSISQARNAIITPARPTSAYKTA ETFLRLVRNLQQENMLPCIIFNMERSVVEHLGKSLIEKLTNDHHDKYYGSEEATNATKAI NKRRQEQYAKDIQRRDMLLKLKTMSRQQREKQGIVIDESELQALENLQAPGDIAEEYDPE FSFCDRKVMGGREREIQDTLYSCEGRISPIFIEGLKRGIGIHHDGLSLRYRRAVETLYRM GYLCIIISTRTLALGVNMPCRTTVFVNDSISLTPLLYRQASGRAGRRGYDVQGSVIFWDI SVGKRNRLLTAELPTIKGNFPVTPTTVLRTFMLFENVLNEQTKNNISKERAVITFKALVK FYRDSLYSVDYNHDFHKKLTATQFRFIVDLLRRFHVLDNYCGCTGYAGLVSHMFEYEGTN LLISKLIHSGVLFNYLFSEHEKNHIETSSNNELANLLKKDPVQRLLILLAHVYLTKPMTR NSIYSIKKQIEKSSFLNLKQKISSGKIQHLLLSLPDYIQREIDEFNEIVFSNMRNSLSVT CADVEFDVTEFNLPLSNNNVLSQKSKLSKDSVISSGIDESIAIDNNSCIQSPFISIMGLD DVKLKSSQQLIYGSRVQLNCTHDLLSMVKADKVILDKEKENVSIIIMLINSFLIDFYESQ RFSEIIKNNSIASSEIFFLISDFKVLLDRFLHSFNLMELQQYQNLNITLSKKSLEFYNNI SRLIEILQVLYNNYRIIASKNDA NT seq 6372 nt NT seq  +upstreamnt  +downstreamnt atggacgatgaatcgttaggctcatgtaagtctttctcaaagcacatgaaggacttctcg gcagttcaaaattctatgaaaaattatggagctccgagcgagatggtagacggttctgaa gcaaatttttcaaaagatttagggatactacagcatttttcaaataacgactcaatactt aatgaaaagttaaatgagcttatgggtatctttaaaaaaagagaatcttcagactcccaa cttgctattaaagaatcaaaacgtatgattggcgaaatcttaaagtggtattttggaatg agtcatgtttcgttgaatgatattactccagatatttctgatgctgaaaatgtctttgta agcgcagatggattactaatcaatctatactactcctttggatttgaagttgattcaaat aattctccccaaacactaccgtatatttacctttttgaaaggttcatgaactaccttatt gaagcaggtacaaaaaggatcattttaatttttcttgatagctttactgatgttctagag aagattaacccaggactgccattattgagagaatccctcattcttcactcaaaattaaat ccagagatatttaatgcataccattttacaagttggctatctgaggatttccaagaattt ttgaaggagcttgaacccagtatattcttgattgaagatggaagttccatttctaatttg gaaagcttagaagtaaaacataggcatcaatttattcaagaagtatctgatgaaaataat gaatctattgacgaatatgattttgaagatttagatgaagtcgatatatctacttcacta ctttcattcgctttagaaatgcttagctattcaaacattgctatctttcataagatggaa cgtaaaggacaaagaattactgcatttacatattcgtctgccatcgagcctcgctttaca gaagcaaacaaaggaattatgaggcaggctgcgcaatcgaaaacaagagacgaaatgagg ttgttatctgatgccaatgaagattttgtaacctgtgacggagaattagataaccatcta cgccttaaagattatgaatataatattgccaaagaatttaaatcttcagagaatgattta tttacccaattagttaaatcactaattcacaactcaatttcagaggaggatttggaactt tccaagtcggatgatgcaattctacacaatattaagctaattcttcttttttctaaagtt acactattgtctggatatctaagaagtcacaaattgagttacttagataggcactacatt tccaattccatgctagagtttaaaaagtgtctagaatccaaattagaacaagatgatttc gacaatgaaggatgggaatttggagccacaattttaaaatctcttgaatcattatttatt tcagaatcaattaaacagctcagattaataattaatcattttgaggagatcaagccatcg ataaataaaggccaacttatctcaaatgtttgcgatctgaatgatccattattgctagag ttcctgttttatattgtaggatacacaagtttgaaggaagaaaatattagagtatcacta tttttggaaattattggtcttgaatcatctgatcaaagtaaattggaagatctttggaac aaaatttcattaatcagtgagccatttttcccgttatcattttcaggaaacttaaataga tatgttactgaggataatgataaaagagttttgagcctattcggagaaactgtgttatct agagaaaaattaagtacccaaagaaatacgtctgtaagcaatgtaggacttttacccatt aattccaaatttgtggtcagagtaatgtccgaactaggagtaggtatatcagatatgggg caaatcaaaggtactgctttagaatctgatgacaagactgtctcccaaaatgaatattta aaccaagtaattcaaatttctggcatcagagatgttgcatcttgggaaattgatagacca caagagacacgtccaaactccaaacaagagtattcaggaggaaaagaaggctcatctgtt aaattacctgcagaccttgaaaagaaacgtcagttacgtgataaccaaagaaagcaacaa ttttggttcaacttaggtcaaatattgactggaaatgataagttgcagcaaacaatcgtt gtgaatccattccacgtttggaacaaactttctgcaaaagaagctgataaagaaaggaac tcttcaggcccctcatcttcttcaaaagcagaagaaatcagacgaaaaaatgaagaggcc aaattaaataaaatgcgtcaagacgatgaaaatcaattgaaataccatgagcagaagcta tctctaattctttctaaaggcgatcctgatactttcatgctttcagtgtacgatatgtta attggaattccacgcaaaactaatgaatttgggcgtttcagaggtctatcaaaattattt aagcttccaaaatcaagaagcaaaatattgattcgaactttacaaacatgtatttcagtt ttgcgtagctttaaaagcagtactcttccagaagtgtcacatatggtaaaggctagattg gcagtttgcatgacttttaggctcgcaattgaaacatttaaccaatattactcttatttc gataaaaccgacttattcgaagttgcaaagattttgaatagtcttgggttcatgtcttcc gcctctaatttggttgagagctacaaatataagatggaattggatataagacgtattgtg gataagactagctcttctaatgatgattctaaaggtaaggggtctgataaaaacaagaaa tctcaaggtggaaagaagcctactcaaaagaaagacaaaaaaagtgtgtctgatcattcc acttttccagaagatacaaactattccgaatatcagaatgtttatttatatgctaagaaa catcttgaggaattgaaacaatcaggcaaatcaggaaaaagtgaaaagattcacctatgt gtccaagatggctgtgaatcttccttccaattacgttacatgggagctgactttgaaaga tccacaggtagcgttgcagatcccagagttccatttagcccagattattggcaaaagcaa attttagatattattgactctggcgactcagcgctagtttgcgctccaacagctagtgga aagactttcatttgttactatgcaatggaacaagttttgaggtttgacaacgaaagcgtc gttgttttcattgcgcccactaaagctcttgcagatcaagtacatgctgaaattgcctat agatttggttctaaaacatacccaaaccactcaaggatttctttactttgtaaactgagc agagattactccattaatattccaactcaatgccaaatcctaattacactaccttttatg ttggaactcttattgatgagtacagcctaccaacaatgggtatcaaaaattaaatttgtt atttttgatgaggtccactgtatcaatgaggctgaaggaggtgtctattgggagaggatt ttccagctgattccttgtccatatttatgtctttctgctacaattggtaacccacttgca ttctataattggctgcaaagaattggaaagcttccctctagtaaagtccactttgttact tacagtgaaagatatgctgatctttctacattggtatatgatgaaggtaacctatatcct ttaaatccgctttcttcactatcttatgatagggttttatactatggccttcctggtgat ttctatcttccaccaaatgatggtcttgatttattcctttctttgaaagagctcctcaaa tgtaattcagaagctacgaaggaatacttggcatggcttgatcctcaattcttcttttct ggaacaccggctatcactaagagacaatatagattttacctttcaactctattggcaatg actgtaaaattagtacaaaataatgttttaaacaaagaaatgtggctaaatataacagga aatttacttttaaatcccagcataagatttcaaaggcaaatggttgagctatccaagaaa aatgattctaatctatataagattattatgggcgtagagaatattaagagcctattaagt ggaattactaattcaaatgatgaagatgctacagaaataggaagtttggctagctcaata tcacaggctaggaatgcaatcattacccccgcaagaccaacttcagcatacaaaactgct gaaaccttcttaagattggtcaggaaccttcaacaagaaaatatgctaccatgtattatt ttcaacatggagagaagtgttgttgagcatttggggaaatcattaatcgaaaagcttact aacgatcatcatgataaatactatgggtcagaagaggccactaatgccacaaaggccatt aacaaacgtagacaagaacaatatgctaaagatattcaaagacgtgatatgttacttaaa ttaaaaacaatgagtcgccagcaaagagagaaacagggcattgttattgatgagagcgaa ttgcaagcacttgaaaacctacaagctccaggagatatagctgaagagtacgatccagag ttttcattttgtgaccgaaaagttatgggaggaagagaacgtgagatccaggatactcta tattcttgtgaaggcaggatttctcccattttcattgaaggtcttaaaagaggtattgga attcatcatgatggtttgagtttaagatacagaagagcagttgaaactctatatcgcatg ggatatttatgtataattatttccacaagaacgttagctcttggtgtaaatatgccatgt agaacaacagtatttgtaaatgactcaatttcattgactccacttctttatcgccaagca tctggaagagcaggaagaagaggctacgatgttcagggctcagttatcttctgggatatt tctgtcggaaaaagaaataggttattaacagcagagttaccaacaattaagggcaacttc cctgttactccaactactgttttgagaacgtttatgctgtttgaaaatgtccttaatgag cagacgaagaataatatttctaaagaaagagcagtaattacctttaaagcgcttgtgaag ttctacagagactcattatactctgttgactataatcacgatttccacaaaaagcttaca gcaacacaatttagatttattgttgacctgctccgcagatttcatgtattggacaattac tgtgggtgtactggttacgcaggacttgtatctcacatgtttgaatatgaaggtacaaat cttcttatttccaaactaatccactctggagtattattcaactacctatttagtgaacat gagaagaatcacattgaaaccagctcaaataatgaacttgctaatttacttaagaaagat ccagttcaaagacttctaatactattggctcacgtatatttaaccaaaccaatgacaaga aattccatatatagcatcaaaaagcaaattgaaaaatcatcttttctcaatttgaagcaa aagatctcatctggaaagatccaacatctccttctttcactaccggactacatccaacgt gaaattgatgaatttaatgaaatagttttctcaaatatgagaaactccttgagtgttaca tgtgcagatgttgaatttgatgtaactgagtttaacctccctctttcaaataataatgtg ttatcgcaaaaatccaaattaagcaaagactctgtaatatcatcaggtattgacgagtct atagcaattgataataattcttgtatacaatcgccattcatttcaattatgggtcttgac gatgtaaaattaaagtcatctcagcagctaatttatggatcgagagttcaattaaactgt acgcacgacttactctcaatggttaaagcggataaagtcatattagataaagaaaaagag aacgtttcaataatcattatgttaatcaactcattcttaattgatttctacgagtcacaa aggttttctgaaattattaaaaataactcaattgcatcatcggaaattttcttcctcata tcagattttaaagtgcttcttgacaggtttctccattccttcaatctaatggagcttcaa caataccaaaatcttaatattactctatctaaaaaatctcttgaattctataacaacatt tccagactaattgaaatcctacaagttctctataacaactatagaataattgcaagcaaa aatgatgcttaa

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