Chitinophaga horti: MKQ68_12280
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Entry
MKQ68_12280 CDS
T09154
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chor
Chitinophaga horti
Pathway
chor02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MKQ68_12280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chor03021
]
MKQ68_12280
Transcription machinery [BR:
chor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MKQ68_12280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
GerE
HTH_38
HTH_40
HTH_Tnp_ISL3
HTH_20
HTH_11
HTH_17
HTH_DeoR
HTH_28
HTH_30
Motif
Other DBs
NCBI-ProteinID:
UYQ95877
LinkDB
All DBs
Position
complement(3057757..3058323)
Genome browser
AA seq
188 aa
AA seq
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MSEAEMLAKIAEGSLQAFRELMVRYEARIYHFIFKLVKSQELAEEITQDVFIKLWEARET
LGSIDAVGAWLHTLSKNKSLNVIKEKAARLAREEQYAGMAALEVSPEQEITLNDYQRILN
DLIANLPPKRKEIFLLKTRDGLSVEEIATLLHLSPHTVKNQLGKSYGTIRQLMSELIYLM
MIAPILQP
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagccgaaatgttagcaaagatcgcggaaggaagcctgcaggctttccgggag
ttaatggtgcggtacgaagcgcgtatctaccattttatttttaaactggtaaagtcgcag
gaactggccgaagagattacgcaggatgtgtttatcaaactatgggaagcacgcgaaacc
ctgggtagtatcgatgctgtcggtgcctggctgcacactttaagtaagaacaaatccctc
aacgttattaaagaaaaagccgcccgtcttgcgcgggaggaacagtatgccggcatggca
gcactggaggtatcgccggaacaggaaatcacgctcaacgattaccagcgcatattaaac
gatctgattgccaacctgccgcctaaacgaaaagaaatctttctgctcaaaacccgcgat
gggctttcggtagaagaaatcgccaccttattacatctctctccccacacggtgaagaac
cagctgggcaagtcttacggcaccatccggcagctcatgtcggagctcatctatctcatg
atgatcgcgcccattttacagccttaa
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