KEGG   Chitinophaga horti: MKQ68_12280
Entry
MKQ68_12280       CDS       T09154                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
chor  Chitinophaga horti
Pathway
chor02020  Two-component system
Brite
KEGG Orthology (KO) [BR:chor00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MKQ68_12280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chor03021]
    MKQ68_12280
Transcription machinery [BR:chor03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MKQ68_12280
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Sigma70_ECF GerE HTH_38 HTH_40 HTH_Tnp_ISL3 HTH_20 HTH_11 HTH_17 HTH_DeoR HTH_28 HTH_30
Other DBs
NCBI-ProteinID: UYQ95877
LinkDB
Position
complement(3057757..3058323)
AA seq 188 aa
MSEAEMLAKIAEGSLQAFRELMVRYEARIYHFIFKLVKSQELAEEITQDVFIKLWEARET
LGSIDAVGAWLHTLSKNKSLNVIKEKAARLAREEQYAGMAALEVSPEQEITLNDYQRILN
DLIANLPPKRKEIFLLKTRDGLSVEEIATLLHLSPHTVKNQLGKSYGTIRQLMSELIYLM
MIAPILQP
NT seq 567 nt   +upstreamnt  +downstreamnt
atgtcagaagccgaaatgttagcaaagatcgcggaaggaagcctgcaggctttccgggag
ttaatggtgcggtacgaagcgcgtatctaccattttatttttaaactggtaaagtcgcag
gaactggccgaagagattacgcaggatgtgtttatcaaactatgggaagcacgcgaaacc
ctgggtagtatcgatgctgtcggtgcctggctgcacactttaagtaagaacaaatccctc
aacgttattaaagaaaaagccgcccgtcttgcgcgggaggaacagtatgccggcatggca
gcactggaggtatcgccggaacaggaaatcacgctcaacgattaccagcgcatattaaac
gatctgattgccaacctgccgcctaaacgaaaagaaatctttctgctcaaaacccgcgat
gggctttcggtagaagaaatcgccaccttattacatctctctccccacacggtgaagaac
cagctgggcaagtcttacggcaccatccggcagctcatgtcggagctcatctatctcatg
atgatcgcgcccattttacagccttaa

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