Chitinophaga horti: MKQ68_16705
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Entry
MKQ68_16705 CDS
T09154
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
chor
Chitinophaga horti
Pathway
chor02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chor00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MKQ68_16705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chor03021
]
MKQ68_16705
Transcription machinery [BR:
chor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MKQ68_16705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
ORC1_wHTH
HTH_7
HTH_40
HTH_28
DUF6362
ApoLp-III
HTH_AsnC-type
HTH_Tnp_ISL3
HTH_24
HTH_16
HTH_5
Terminase_5
HTH_29
SpoIIID
DUF445
RPT
HTH_38
Motif
Other DBs
NCBI-ProteinID:
UYQ91730
LinkDB
All DBs
Position
complement(4135824..4136426)
Genome browser
AA seq
200 aa
AA seq
DB search
MNRTMPAEDVVVLEALREGRQDAFEAIFNKYWQEMYATAYQRLRDQTVAEDMVQDVFTSI
WERRYELQINSPLEHYLRRAIKYSIIKYLSRANLHEAAVKHLLDRVADMEHTVLDQLNVR
DVNRTLAEAIKDFPGNMRQVFLLRAENYTISEIAEALGLAEQTVKNNTTEALKRLRTTLS
EKHPDIHQSFYALLILLIQS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggacgatgccagcggaagacgtagtggtgctagaagcgcttcgggaaggacgg
caggatgcatttgaagccatatttaataaatactggcaggagatgtatgctaccgcttac
cagcgcctgcgcgaccaaaccgttgccgaagacatggtacaggatgtgttcaccagcatc
tgggagcgccgctacgaattgcagatcaattccccccttgaacattacctgcgccgcgcc
attaagtacagcatcattaaataccttagtcgcgctaacctgcacgaagctgccgtaaaa
cacctgctcgatcgcgtagccgacatggaacacaccgtactcgaccagctcaacgtacgc
gatgtgaaccgtacactcgccgaagccatcaaagattttcccggaaacatgcgccaggta
tttttgttgcgcgcagaaaattatacgatatctgaaatagcagaagcattaggcctcgcg
gaacaaaccgtgaaaaacaatactacagaggctttaaagcgtttacgcacgacgctctcc
gaaaaacaccccgacattcaccagtctttttatgcgctccttattctgttaatacagagt
taa
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