Caulobacter henricii: AQ619_09825
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Entry
AQ619_09825 CDS
T04110
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
chq
Caulobacter henricii
Pathway
chq03410
Base excision repair
chq03430
Mismatch repair
chq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AQ619_09825
03430 Mismatch repair
AQ619_09825
03440 Homologous recombination
AQ619_09825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chq03400
]
AQ619_09825
DNA repair and recombination proteins [BR:
chq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AQ619_09825
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AQ619_09825
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AQ619_09825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
RecJ_OB
DHH
Motif
Other DBs
NCBI-ProteinID:
ALL13620
UniProt:
A0A0P0NZN3
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All DBs
Position
complement(2115310..2117118)
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AA seq
602 aa
AA seq
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MADRRGPVEDDAFLGVSRSLSGRAWRERPADPAVARSHQQVHGLSEPLARALAARGVDVD
GAGDFLRPTLRALFPDPSLFMDMDRAAEILIDALEAGRPTMVFADYDVDGATSAAQLVRW
FRHMGVELPIYIPDRLTEGYGPSPAAFKTIRETGAELVVTLDCGAAAYDAIASAATIGLE
VVVIDHHLMREDPPAAAAVVNPNRPGCQSGQGVLAAAGVTFVLLAALNREARKRGLFSEE
RPQPDPRQWLDLVAMGEVCDVTQLVGFNRALTTLGLRTMSSWGNPGLKALFEVGKGSGPA
SVFHAGFILGPRINAGGRIGRSDLGARLLSTDDPEEARMLAEELDALNTERKAVEASVVE
EAAAVLERGSNFNPDAPVIVVAGEGWHPGVIGIVAGRLRERYRKPVVVIGIDRAANVGKG
SGRSQPGVNLGAAIQAAFEQGLLMSGGGHAMAAGLSIRPDSIPELRAFLEARLAGEMEAV
GPEAVEIDALVQPRGADRALYEDFQRLAPFGPGNPEPMFALTGVRADRVMALKGGHVKLD
LVGPTGERLKAISWRSAETDLGRRLLSGGGVLHVAGKLKPDDYNGRNGVQLEIEDAADPR
AV
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcgtcgtggtcctgtcgaagatgacgccttcctgggcgtctcgcggtcgctg
agtggccgcgcctggcgcgagcgtccggccgatccggcggtggcgcgcagccatcagcag
gtccatggtctttccgagcccttggcccgcgccctggctgctcgcggtgtggatgtcgac
ggggcaggagactttctgcgaccgaccctgcgggccctgtttcccgatccctccctcttt
atggacatggaccgggccgcagagatcctgatcgacgccctggaagccggccggccgacc
atggtgtttgccgactatgatgtcgacggggccaccagtgccgcccagctggtccgctgg
tttcgacatatgggcgtcgagctgccgatctatattcccgatcgtttgaccgagggctat
ggccccagtccggccgccttcaagaccatccgcgagaccggagccgaactggtcgtgact
ctggactgtggcgcggcggcctatgacgccattgccagtgccgccaccatcggcctcgaa
gtggtggtgattgaccaccacctgatgcgcgaagatccccctgctgcggccgccgtggtc
aatcccaatcgtccgggttgtcagagcgggcagggggttctggccgccgccggcgtgacc
ttcgtcctgcttgccgccctcaatcgcgaagcccgcaagcgcggtctgttcagcgaagag
agaccccagcccgaccctcgccaatggctcgacctggtggccatgggcgaggtctgtgat
gtcacccaactggtcggcttcaaccgtgccctgacgacccttggtcttcggacgatgtcc
agttggggcaaccccggcctcaaggccctgttcgaggtcggcaagggctctgggccggct
tcggtgttccatgccggtttcattctgggccctcgcatcaatgctggcggcaggatcggc
cgatccgacctgggcgcgcgcctgttgtcgacggatgatcctgaagaagctcggatgctg
gccgaggagcttgatgccctcaataccgagcgcaaggcggtcgaggcctccgtggtcgag
gaggccgccgcagttctggaacgtggcagcaacttcaatcccgacgcgccggtcatcgtt
gtggccggtgaggggtggcatcccggggtgatcggcatcgtcgccggccgccttcgcgaa
cgctatcgcaagcccgtggtagtaatcggcatcgaccgtgccgccaatgtcggcaagggc
tcgggccgttcgcagcccggcgtcaatctgggcgcggccatccaggccgcgttcgaacag
ggcctgctgatgtcgggcggcggtcatgccatggccgccggactgtcgatccggccggac
tccatcccggaactgcgcgcttttctggaggcgcggctggcgggcgagatggaggccgtt
ggccctgaggccgtcgagattgatgccctggttcagccgcgcggggcagaccgggcgctc
tatgaggattttcagcgtctggcaccgttcggacccggcaatcccgagccgatgttcgcc
ctgacgggggtccgcgccgaccgggtgatggcgctgaagggagggcacgtgaagctggat
ctggtcggcccgactggcgagcgtctaaaggcgatttcctggcgcagtgcggaaacggat
cttggccgccgactcctgtcgggcggcggcgtgctccacgtcgcgggcaagctgaagccg
gatgactataatggccgcaatggcgtccagctggagatcgaggacgccgccgacccgcgc
gccgtttga
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