Chlamydia psittaci RD1: Cpsi_9911
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Entry
Cpsi_9911 CDS
T02153
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
chr
Chlamydia psittaci RD1
Pathway
chr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cpsi_9911 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chr03400
]
Cpsi_9911 (recD)
Enzymes [BR:
chr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Cpsi_9911 (recD)
DNA repair and recombination proteins [BR:
chr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cpsi_9911 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
PIF1
SLFN-g3_helicase
Helicase_RecD
AAA
PhoH
AAA_22
DEAD
nSTAND3
ResIII
ATPase
IstB_IS21
DnaB_C
AAA_12
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CBY17497
LinkDB
All DBs
Position
complement(1156086..1157600)
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AA seq
504 aa
AA seq
DB search
MLSLSPDVSHLLYDVVQQQIVLPLDLAFAKRHISPESKKAFAFLAISSALWRCGYPFLSI
ENERLFPSVSGISEKLFYEYFQALPHDVLSSLFVIENNKIYLKSLYTVREKLFKKLSLLS
QASNRYSLTTTTLSSLSQEQNEVFHKAVNSCFSLICGGPGTGKTFLAVQIIIALIKQYPK
IRIAIVSPTGKATSHIRHILSKHHISESSVTIQTIHRFLQEHAYHQCASFDLLLVDEGSM
VTFSLLHSLVNTLSGENKHGKIIADNLIILGDENQLPPIGVGAGNPLQDLIARFPERALH
LHVSHRAKTNRVQNFARAVLERQAIPFTPLPPLLTALSMIKEAFINTPSSQTQLCVLTPM
RHGPWGYLRLNELLFHEIQKTHPELPIPIMITERYEAWGLFNGDTGYLCPKTQKLFFSHS
RFIDAKEFSYYTYNYAMSVHKSQGSEYEDVIVIIPKGCETFDISILYTAITRAKNNIDVW
ADRETLYKIIKKPHKYTYGVDRLL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgttaagcccggatgtttctcaccttctttatgatgtagttcaacaacagatt
gttctacctttggacctagcttttgcgaagcgccatatctctccagaatcaaaaaaagcg
tttgcatttctggctatttcttctgctctttggcgttgtggttatccctttcttagtata
gaaaatgagcgtttattcccttcagtatccggaatttctgaaaagctgttttatgaatat
tttcaggctcttcctcacgatgttttgtcgtcgttgtttgtgatagaaaataataaaatt
tatttaaaatctttatatacagttcgtgagaaactttttaaaaaactctctttgttgtca
caagcttctaatcggtacagcctgactacaacaactctgtcgagtttatctcaggagcaa
aatgaggtttttcacaaagctgttaacagttgtttttctttgatctgtggtgggccggga
acagggaagacatttcttgctgtacagataatcatcgcgttaattaagcagtatcctaaa
atccgtattgctatagtctctcctacaggaaaagcaacctctcatatccgtcacatactc
tctaaacatcatatttctgagtctagtgtcacaatccaaacaatacaccgattcttgcaa
gaacatgcgtatcaccagtgcgcttcttttgatttattattagttgatgaggggtctatg
gtgacatttagtcttctgcatagcctagtcaacactttatcaggggaaaataaacacggg
aaaatcattgctgataatttaattatattgggagatgagaatcagctcccccccataggt
gttggcgccggaaatcctcttcaagatttgatagcacgtttccctgaaagagctctacat
cttcatgtttctcacagagctaaaacaaatagagttcaaaattttgctagagctgtttta
gaaagacaagccattccttttacccctttgcctcctttgctcactgcactttctatgatt
aaagaggcgtttataaataccccctcatctcaaacacaattgtgtgttttaactcctatg
cgacatggtccttggggatacctacgcttaaatgaactgctctttcatgaaatacaaaaa
acacatccagagttacccattcctattatgataacagaacgttatgaagcttgggggcta
tttaatggtgatacggggtacctttgcccaaagacgcaaaagttatttttttctcactct
cgctttatcgatgccaaagagttttcttattatacctataactacgctatgtcagtgcat
aaaagtcagggaagtgagtacgaggacgtcattgttattatccctaaagggtgtgaaact
tttgacatttctattctttacacagcgatcacacgtgcaaagaacaacatagatgtgtgg
gctgatcgagagacgttgtataagatcataaaaaaaccccataagtatacttatggggta
gatcgtcttctttag
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