Chromobacterium phragmitis IIBBL 274-1: DK843_18805
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Entry
DK843_18805 CDS
T05744
Name
(GenBank) TIGR01621 family pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chrb03009
]
DK843_18805
03016 Transfer RNA biogenesis [BR:
chrb03016
]
DK843_18805
Enzymes [BR:
chrb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
DK843_18805
5.4.99.29 23S rRNA pseudouridine746 synthase
DK843_18805
Ribosome biogenesis [BR:
chrb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DK843_18805
Transfer RNA biogenesis [BR:
chrb03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
DK843_18805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AXE36164
UniProt:
A0A344ULL6
LinkDB
All DBs
Position
3911557..3912231
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AA seq
224 aa
AA seq
DB search
MYTLIHQDPRFYLVDKHPGVGFHREEDQPGLMDALRAGLGDEALWPVHRLDRITSGLILV
ARTAEAARQLGDALAGREMEKYYLALSDRKPLKKQGKVAGDMAKGRGGAWRLTADRENPA
VTQFFSYSLAPGLRLFLLRPRTGKTHQLRVAMKSQGAPILGDALYGGSAADRGYLHAYAL
RFALDGERFAFLCPPTAGQAFAAETCRAKLSELGAPWEQPWPAA
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccctgattcatcaagatccccgtttttatctcgtcgacaagcatcccggcgtt
ggctttcaccgcgaagaggatcaaccgggtctgatggacgcgttgcgggcagggctgggc
gatgaggcgctgtggccggtgcataggctggaccgcatcacctccggcctgattctggtg
gctcgcaccgccgaggcggcaaggcaactgggcgatgcgctggccgggcgcgagatggag
aaatactatttggcgctgtccgaccgcaagccgctgaagaagcagggcaaggtggccggc
gacatggccaagggccggggcggcgcctggcgcttgacggcggacagggaaaatccggcc
gtcacgcagtttttcagctattcgctggcgcccggcttgcggctgttcctgctgcggccg
cgcaccggcaagacgcatcaattgcgggtggcgatgaagtcgcagggcgcgcctatcctg
ggcgacgcgctgtacggcggcagcgcggcggaccgcggttatctgcacgcctatgcgctg
cgttttgcactggatggggagcgtttcgcctttctgtgcccgccgacggcggggcaggca
ttcgccgccgagacctgccgcgccaagctttctgagcttggcgcgccgtgggaacagccc
tggccggccgcctga
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