Chromobacterium paludis: FYK34_20185
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Entry
FYK34_20185 CDS
T06224
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
chrm
Chromobacterium paludis
Pathway
chrm00521
Streptomycin biosynthesis
chrm00523
Polyketide sugar unit biosynthesis
chrm00541
O-Antigen nucleotide sugar biosynthesis
chrm01100
Metabolic pathways
chrm01110
Biosynthesis of secondary metabolites
chrm01250
Biosynthesis of nucleotide sugars
Module
chrm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FYK34_20185 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FYK34_20185 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FYK34_20185 (rfbC)
Enzymes [BR:
chrm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FYK34_20185 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QEL57718
UniProt:
A0A5C1DP65
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All DBs
Position
complement(4248627..4249169)
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AA seq
180 aa
AA seq
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MNVIDTEISDVKIIEPAVFGDERGFFFESFNQKKFEETIGYSVEFVQDNHSRSAKGVLRG
LHYQLDPHAQGKLVRVIAGAVFDVAVDIRQQSPTFGRWVGVELSADNKRQMWIPPGFAHG
FLTLSDDAEFLYKTTDYWFKDLERAIAWNDPDLAIDWPLKHPPALSPKDQAAPLFTTLGA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcatcgatacagaaatttctgacgtcaagataatcgaacccgctgtttttggc
gatgagcgcggatttttcttcgagagtttcaaccaaaagaaattcgaagagaccataggc
tattcggtcgaatttgtacaagacaaccatagtcgctcagctaagggcgtactacgcgga
ctgcactaccagctcgatccacatgcccaaggcaaactcgtccgagtcatcgccggcgcg
gtgtttgacgtagccgtcgatatccgacagcaatcgcccaccttcggccggtgggttggc
gtggaattgtccgcagacaacaaacgacaaatgtggattccccctggtttcgcccatggc
ttcctgacactgagcgacgacgcggaatttctgtacaaaaccaccgactactggttcaaa
gatcttgagcgcgccatcgcctggaatgacccggatctggcaatagactggccgctaaag
cacccgccggcactatcacccaaagatcaggcagcgccgctgtttacgacgcttggcgcc
taa
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