Cytophaga hutchinsonii: CHU_2838
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Entry
CHU_2838 CDS
T00385
Name
(GenBank) conserved hypothetical protein
KO
K10979
DNA end-binding protein Ku
Organism
chu
Cytophaga hutchinsonii
Pathway
chu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CHU_2838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chu03400
]
CHU_2838
DNA repair and recombination proteins [BR:
chu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CHU_2838
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
EFP
Motif
Other DBs
NCBI-ProteinID:
ABG60086
UniProt:
A0A6N4SV06
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All DBs
Position
complement(3240012..3240791)
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AA seq
259 aa
AA seq
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MKTIWTGAIGFGLVNIPVKLFSATHESRLDLDMLDKKDHSNIKFQRVNAKTGKEVAWDNI
VKGYKIEDDYVILDEKDFEKANAKKTKTIEILQFVQEDEIDSVYFETPYYIQPDKSGTRA
YALLREALIKSKKVAVANYVLRNKEALAILKPVGNVIVLNKIRFQEEILDADALDLPAKS
AIKEGEMKMALSLIDQLTETFDISKYKDTYTSELLKLIKAKAKGTVVKTKSAASKPTATK
DLMAQLKASLQPTKRAAAR
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaatctggacaggtgcgatcgggtttggtctggtaaacatacccgtaaaatta
ttcagtgctacacatgagagcagacttgacctggatatgctggataaaaaagaccattcc
aacataaaattccagcgtgtgaatgccaagacgggcaaagaagtagcatgggataatatt
gttaaaggatataagatagaagatgattacgtgatccttgatgaaaaggattttgaaaaa
gcgaatgcgaaaaaaacgaaaacaattgaaatcctgcaattcgttcaggaagatgaaatt
gattccgtgtatttcgaaacgccgtattatattcagcccgacaaatcgggcacgcgcgcg
tatgccttgctgcgtgaagcattgataaaatcaaagaaagtagcagtagcaaattatgta
cttcggaacaaagaagcactggcaatcctgaaaccggtcggtaatgttattgtattaaac
aagatccgttttcaggaagaaatcttagatgcagatgcacttgatcttcctgctaaaagt
gcaatcaaagaaggtgaaatgaaaatggcactttcactgattgatcagctgacggaaacg
tttgatatttctaaatacaaagacacttatacatcggaattgttgaagctgattaaggca
aaagcaaaaggtacggttgtcaaaacaaaatcagcggcttccaaacctactgcaaccaaa
gatctgatggcacagttaaaagccagtctgcagccaacgaaaagagcagcagcacgataa
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