Capra hircus (goat): 102177837
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Entry
102177837 CDS
T02910
Symbol
ABCA6
Name
(RefSeq) ATP-binding cassette sub-family A member 6 isoform X1
KO
K05649
ATP-binding cassette, subfamily A (ABC1), member 6
Organism
chx
Capra hircus (goat)
Pathway
chx02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102177837 (ABCA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chx02000
]
102177837 (ABCA6)
Transporters [BR:
chx02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
102177837 (ABCA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
RsgA_GTPase
AAA_16
nSTAND1
AAA_29
AAA_22
AAA_23
AAA_15
Motif
Other DBs
NCBI-GeneID:
102177837
NCBI-ProteinID:
XP_017919410
EnsemblRapid:
ENSCHIG00000012837
LinkDB
All DBs
Position
19:60634503..60700878
Genome browser
AA seq
1626 aa
AA seq
DB search
MHMKQKSVYQQTQALLCKNLLKKWRMKRENLLEWGFLILLALHMCILSHLNQNVHFPGMP
PQNLGRVDKYNRSFMDVVYTPVSNLTQQIMNTTAFAPVMKGRRIIGAPDEKSMDEIMLDT
FSYSVGVIFNDSFSYKLKFYRRYYVPILKEDFFTAYCRRTNISDFSCALEKYWKGGFVPL
QAAINAAIIQTTANHYVMEELMSVTAVNMKTPPFIFKENLQNEMFIFYCLLYFSPFLYFL
SLNVTRERKKYKDLMNLMGLQDSAFWLSWGLIYAAFIFVASVIITVIITSTEIIILTGFT
VIFTLFFLYGLSLIALVFLMTVLLKKTFLTSLLVFLLTLFWGSVGFTAFHQQLPSPLKWV
FSICSPFAFSAGLNQIIHLDYTMNGVVFPDASGDSYIMIATFSMLTFDALLYLVLALYFD
KILPYGHESHYSPLFFLNSSSCIQHRRTGSHVAEKDVDPEPRSDDHCEPVAPEFQGREAV
RIRNVKKVYKEKTGKVEVLKGLCFDVYEGQITAILGHSGAGKSALLRVLSGSSVPTEGSV
TIYNKNLSEMQDLEEIQKITGVCPQFNVHFDTLTVKENLRLFAKIKGIQPKDVEQEVQRV
LLELDIENIQDNLATLLSEGQKRKLTVGIALLGDPQVLLLDEPTAGLDPFSRHRVWSFLR
ERKAGRVILLSTNLTDEADILADRKVILSNGRLKCAGSSVFLKRRWGLGYHLSLYRNETC
DPEKITSLINHHIPDAKLKMESKEKLVYTLPAERTNKFPDLFGDLDEGCSLGVMSYEVST
STLNEVVTKLEGNSVAEQDFEQEEMSRDTGRLHEKDPPCPSAPETQKAVSVAGLWRLQFW
VMARLRFLQLRRGKKGLLTLLFVFGVAVFPLIVESIFYAVLNETTDWEFKPELYFLSPGQ
LPQDPRTSLLIINNTESNIEDFIQSLKHQNILLEVDDFENRNGTEDPSYNGAIIVSGKQK
DYRFSVVCNTKRLHCFPVLVSVVSNALLRMFNQTRRIRTKRSAYPLGHVLLWTGLPQGSF
FLFFVTCSLSPYIAMSSISDYKKRTKSQLWVSGLFPSAYWCGQALVDVSLYSLILLSMYL
IFYLANMVYIYLTSRVIFALVVMTLGYAASLIFLTYVIAFIFRKRRKNSGLWSFCFYVVT
VIAFGIIMLFAPDVPVLITCMTLVPSATLSGFTAFLQQRISQYWIKYQEANYDLSAADFL
VCLIPYFQALLFMFVLRCLEAKCGKKIMQKDPVFRISPQSRDARSNTEKPVAEDEDVQAE
RIRTATALNTSVEEKPVIIASCLHKEYAGQKKRCFSRRRKKTAVRNISFCVKKGEILGLL
GPSGAGKSSSVRMISGMMAPTAGEVELTGYGSDPAQQGDASIRFLGYCPQENVLWPSLTT
RDHLEVFAAVKGLQRADARVAISRLVDAFKLHEQLNVPVQKLPGGAARKLCFVLSLLGDP
PILLLDEPSTGLDPTEQKQLWQTIQRAVRNTARGALLTTHSMAEAEAVCDRVAIMVSGRL
RCIGSIQHLKNRLGKDYILELKLKEASQGMSVHTEVLRLFPQAAQQERYSSFSAYRLPVQ
DVQPLSQAFHKLETVKRNFNLEEYSLSQCTLEKVFIELSKEQELGNVDEGVDTIMRWKLL
CPSEGP
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atgcatatgaaacagaaaagtgtataccagcaaacccaagcacttctgtgcaagaatctc
ctgaagaaatggaggatgaaaagggagaacctgctggaatgggggttcctgatactttta
gcccttcatatgtgcatactttcacatttaaatcaaaatgtccattttcctggaatgcct
ccccagaacctgggaagggtagataaatataatagatcttttatggatgttgtgtacaca
ccagtctccaacttgacccagcagataatgaatacgacggcattcgcccccgttatgaaa
ggaagaagaatcattggggcaccagatgagaaatccatggatgaaataatgctagacact
ttctcatacagcgtgggcgtcatctttaacgactctttctcttataagttaaaattttat
cggagatattacgttcccattttgaaggaggattttttcacagcttactgccggcgtacg
aatatcagtgacttttcctgtgcactggagaaatactggaaaggaggattcgtgcctcta
caagctgccattaatgctgctattatacaaacgacagcaaatcactatgtgatggaggag
ttgatgtcagttactgctgtaaatatgaagacaccaccctttatctttaaggagaacctt
caaaatgagatgttcattttttactgcttgctttacttctccccgtttctatatttccta
tcactcaatgttacaagagagagaaaaaagtataaggatttgatgaacttgatgggtctg
caagattcagccttctggctctcctggggtttaatctatgctgccttcatctttgtcgct
tccgtaatcatcacagtcatcataacatctactgaaattatcatcctgacaggcttcaca
gtcatatttactctctttttcctgtatggcttatccttgatcgctctggtgttcctgatg
actgtgctgctaaagaaaaccttcctcaccagtttgctcgtgtttctgctcaccctcttc
tgggggagtgtgggattcactgcgtttcaccaacaacttccttcacctttgaagtgggtt
ttcagtatctgcagcccctttgccttcagcgctggccttaaccagattatccacctggat
tatactatgaatggggtcgtttttcctgacgcttctggagactcatatataatgatcgct
actttttccatgttgactttcgatgcccttttatacttggtgttggcgttatactttgac
aaaatcctaccctatggacacgagtcccattattcgccattgtttttcctgaactcctca
tcttgtatccaacaccggaggactggtagtcatgtcgctgagaaagacgtggaccctgag
ccccgctctgatgatcactgtgagcccgtagccccagaattccagggcagagaagccgtc
agaatcagaaatgttaaaaaagtatataaagaaaagactggaaaagtggaagtactgaaa
ggcttgtgctttgacgtctatgaaggtcagatcacggcaattctgggtcacagtggggct
ggcaaatcggcgttgctgcgcgtccttagcgggtcgtctgttccaacagaaggatcagtt
accatctataataaaaatctctctgaaatgcaagacttggaggaaatccaaaagataact
ggtgtttgtcctcaattcaatgttcactttgacacgctcactgtaaaggagaacctcagg
ctgtttgcaaaaataaaaggaattcagccaaaggacgtggaacaagaggtacaaagagtt
ttactggaattggacatagagaacattcaggataatcttgctacacttttaagtgaaggt
caaaaaagaaagctgaccgttgggattgcccttttaggagatcctcaagttttgctatta
gatgagccaactgcgggattggaccctttctcaagacatcgagtgtggagcttcctcagg
gagcgcaaagcaggccgtgtgatcctcctgagcaccaacctgacggatgaagcggacatc
ctggctgataggaaagtgatcctgtccaacgggaggctgaagtgtgcgggctcctctgtc
tttctgaagcgaagatggggtctcggctatcacctaagtttgtacagaaatgaaacgtgt
gatccagaaaaaataacatccctcattaatcaccacatccctgatgctaaactgaaaatg
gaaagcaaagaaaagcttgtgtatacattgcctgcagaaaggacaaataaatttccagac
cttttcggtgacctcgatgagggttgcagcctgggtgtgatgagttatgaggtttccaca
tcaactctgaatgaagtcgtcacgaaactggaaggaaactcagtggctgagcaagatttt
gaacaagaggagatgagcagggacacgggtcggctgcatgagaaggatccaccttgccct
tctgcccccgagacgcagaaggctgtgagcgtcgcgggcctctggaggctgcagttctgg
gtgatggcacggctccgtttcttacagttaagaagaggaaagaaagggcttctgacccta
ctgttcgtgtttggagttgcagtgttccctttgattgtggaaagcatattctatgctgtg
ttgaatgaaaccactgattgggaatttaaacctgagttgtatttcctctctccgggacaa
cttccccaagacccccgtaccagcttattgatcatcaataacacagaatcaaacattgaa
gacttcatacagtcactgaagcatcaaaatatacttttggaggtagatgactttgaaaat
agaaatggcaccgaagatccgtcctacaacggggccatcatcgtttcaggcaaacagaag
gactatcggttctcagtcgtgtgcaacaccaagaggctgcactgctttcccgtcctcgtg
agcgtcgtcagcaacgcgctgcttcggatgttcaatcaaacgcggcgcattcggaccaag
agaagcgcgtacccgttgggccacgtgctgctctggacggggctcccccaaggctcgttc
ttcttgttttttgtcacgtgcagcctgtctccttacatcgccatgagcagtatcagcgat
tacaaaaagagaaccaagtcccagctgtgggtctctggcctcttcccctctgcgtactgg
tgtgggcaggcgctggtggatgtcagcctctacagtctcattctcctttccatgtatttg
attttctacctagcaaacatggtgtacatttatctcacaagtcgagttatatttgctttg
gttgtcatgacgcttggttatgcggcttcacttatcttcctgacatacgtgatagcgttt
atttttcgtaagaggagaaaaaatagcggcctttggtcattttgcttctatgtagtcacg
gtcatcgcatttggcatcattatgctgtttgctccagacgtccctgtcctgataacttgc
atgactttagttccctcagcaaccttgagtggatttacagctttcttgcaacagagaatc
tctcaatactggataaaatatcaagaggcaaattatgacctgagtgcagctgactttcta
gtgtgtctaataccttactttcaggctttgctcttcatgtttgtcctgcgatgcctagaa
gcaaaatgtggaaagaaaataatgcaaaaggatcctgttttcagaatttccccccaaagc
agagatgctcgttcaaacacagaaaaacctgtagctgaagacgaagatgtccaagcagaa
agaataagaacagccaccgccctgaacacgtcagtagaggagaaaccggtcataattgct
agctgtctgcacaaagaatatgcaggccagaagaaaaggtgcttttcaagaaggaggaag
aagacagcagtgagaaacatctccttctgtgttaaaaaaggagaaattttggggttgctg
ggacctagcggtgctggtaaaagctcgtctgtcagaatgatatctgggatgatggcgcca
acggctggagaggtggagctgacggggtacggttcggatccggctcagcagggggacgcc
agcatccggttcctgggctactgtccccaggagaacgtgctgtggcccagcctgaccacg
cgcgaccatctggaggtgtttgccgccgtgaaagggctgcagcgagcagacgcccgagtg
gccatctcacggctggtggacgccttcaagctgcacgaacagctgaacgttcccgtgcag
aagttaccgggaggggccgccagaaagctgtgttttgtgctgagcctcctgggagaccca
cccatcctgcttctggatgagccgtccacgggcttggaccccacggagcagaagcagctg
tggcagacgatccagagagccgtcagaaacacggcgcggggggccctgctgaccacccac
tccatggccgaggcggaggctgtgtgcgaccgtgtggccatcatggtgtccggcaggctg
agatgcatcggctccatccaacacctgaaaaaccgcctcggcaaggattacattctggaa
ctaaagctgaaggaggcttcccaggggatgtcagtccacacggaggtcctgcggcttttc
cctcaggccgcccagcaggaaaggtactcctctttctcggcttacagactgcctgtgcag
gatgttcagcccctctcccaggcctttcacaagttagagacagtgaaacgtaactttaac
ctggaagaatacagcctctctcagtgcaccttggaaaaggtgttcatagaactttctaag
gagcaggagctgggaaatgtcgatgaaggggttgatacaatcatgagatggaaactcctc
tgcccctcagagggcccgtga
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