Capra hircus (goat): 102178551
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Entry
102178551 CDS
T02910
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
chx
Capra hircus (goat)
Pathway
chx03250
Viral life cycle - HIV-1
chx04623
Cytosolic DNA-sensing pathway
chx05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102178551 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102178551 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
102178551 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chx03400
]
102178551 (SAMHD1)
DNA repair and recombination proteins [BR:
chx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102178551 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
SAM_2
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
102178551
NCBI-ProteinID:
XP_017913310
EnsemblRapid:
ENSCHIG00000027049
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Position
13:complement(65484164..65551011)
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AA seq
609 aa
AA seq
DB search
MQNADSQKTPKRPRRDGSPRTPPNSPPADAETSPSHDLDPDYRTWGPEQVCSFLRRCGFS
DSELLKLCREKKMAGSLLPFPEDLGISSYGKRTKLLNCIQHTMKVINDPIHGHIEFHPLL
IRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVRELSEKQPELQIS
ERDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEIKWTHEQGSVMMFEHLINSNGLQD
VMKHYGLIPEEDIVFIKEQITGPLESPIKDPSKWLYKGRPKEKSFLYEIVANKRNGIDVD
KWDYFARDCHHLGIQNSFDYKRFLKFARVCDVDNMKHICTREKEVGNLYDMFHTRNCLHR
RAYQHKVGNIIDTMITDAFLKADDYIEITGSAGKKYRISTAIDDMEAFTKLTDNIFLEIL
YSTDPNLDDARTILKKIESRNLYKFVGETQPREEKIEKENYEHLPKEIASAKPSDVELEA
ELKAEDLIVDVINMDYGMEDKNPIDHVRFYCKSDLSKAIMITKNQVSQLLPERFAEQLIR
VYCKKTDEKTLFAARQHFVHWCLISNFTKPQDGDVVAPLITPRKLEWNTAGTQEEAKKAK
TQLFPSDSM
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatgccgactcccagaagacccctaagcggccccggcgcgatggcagcccaaga
acgccgccaaactcccctcctgcagacgcagagacgtccccgagccacgacctcgacccg
gactaccgaacctggggcccggagcaggtgtgctccttcctaaggcgctgtggcttcagc
gattcggagctgctgaaactctgccgagagaagaaaatggcaggttcattactgcccttt
cctgaagatcttggaataagttcctatgggaagagaacgaagctgcttaattgtatccaa
catacaatgaaggtgatcaatgatcctatccatggccacattgaatttcaccctctcctc
atccgaatcatcgacacacctcaatttcagcgcctgcgatacatcaagcagttgggaggc
ggttactatgtttttccaggagcttcacacaatcgatttgagcacagtctaggcgtgggg
tatctagcaggatgtctagttcgtgaactgagtgaaaaacaaccggagctacagataagt
gaacgagatatcctctgtgttcagatcgctggtctttgtcatgatcttggtcatgggcca
ttttctcatatgtttgatggaagatttattcctcttgctcgaccagagataaaatggacg
catgagcagggctcagttatgatgtttgagcacctcatcaattctaacggactccaagat
gtcatgaaacactatggtctcatccctgaggaagatattgtgtttatcaaggaacaaatt
acaggaccacttgaatcacccatcaaagatccttcaaagtggctctataaagggcgtcct
aaagaaaaaagcttcctttatgagatagtggccaataaaagaaatggcattgatgtggac
aaatgggattattttgccagggactgccatcatcttggaatccaaaatagctttgattac
aagcgctttcttaagtttgcccgtgtctgtgacgtagataatatgaagcatatttgtact
agagaaaaggaggttggaaacctgtatgacatgttccatacacgcaactgtttgcaccgc
agagcttatcaacacaaagttggcaacatcattgatacaatgattacagatgccttcctc
aaagcagacgattacatagagataacaggttctgcaggaaaaaagtatcgcatttctaca
gcaattgatgacatggaagccttcactaagctgacagataacatttttctggagatctta
tactccactgatcccaatctggatgatgcacgaacgattttaaagaaaattgaatcccgt
aatctatacaagtttgtgggtgagactcagccccgggaagaaaaaattgaaaaggaaaac
tacgaacaccttccgaaagagatcgccagtgctaaacccagtgatgtagagctagaagct
gaactaaaggctgaagatttgattgtggatgttatcaacatggattatgggatggaagac
aagaatcctattgatcatgttcgcttctattgtaagagtgacctcagcaaggcaatcatg
attactaaaaaccaggtttctcagcttttgccagagagatttgctgagcagctgattcga
gtttactgtaagaagacagatgaaaagactctgtttgctgcacgacagcacttcgtccat
tggtgtttaatcagtaacttcaccaagccacaggatggtgacgttgtagccccgcttata
acacctcggaaattggagtggaatacagctggcacccaggaagaggccaaaaaagccaaa
acccagcttttcccaagtgactcaatgtga
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