Capra hircus (goat): 102189672
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Entry
102189672 CDS
T02910
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
chx
Capra hircus (goat)
Pathway
chx04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102189672 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Big_9
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
102189672
NCBI-ProteinID:
XP_013821355
EnsemblRapid:
ENSCHIG00000026018
UniProt:
A0A452G5J2
LinkDB
All DBs
Position
8:29151021..29330365
Genome browser
AA seq
2180 aa
AA seq
DB search
MSSPSWGGLGALLLLLLLPGWASPTFVRVNQGVRVMKGSSAFLSQDDLKFTIPKEKDACK
VEVVMNEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDTVKLRLYRFTETDTFTE
TFTLRVYLLEPDCNIIRVSDDALEVSEFYGLSRVIDKNLLRFDYERMASLECTVRLDPVG
TQLPAHGQLVLVEPQLEEPRGDQPHSFFPESQLGTELKCPGGRCTLGLKKVGSLKVSCEE
FLLMGLRYQHLSSPSPNIDYFSIQLDLTDSRSKITYKSERAWLPVYIRPGIPNQIPRAAF
MAMFILEVDQFILTSLTTSVLDCEEDETPKPLLVFNITKAPLQGYVTHLWDHTRPVSSFT
WKDLRDMQIAYQPPNSSHSERRLYEVELEVYDFFFEKSAPITVHIAIRTADTNAPRVSWN
TGLNLLEGQSRAITWEQFQIVDNDDIHAVQVVTVDGLQHGRLTVRGGKGFLFTVADLQAG
VVRYHHDDSDSTKDFVVFRIFDSQHSIQHKFPINILPKDDSPPFLITNVVIELEEGQTIL
IQGSMLRASDVDSSDDYIFFNITKPPQAGEIMKKPAPGLIGYPVPGFIQRDLFNGIIYYR
HFGGEIFEDSFEFVLWDSHEPPNLSVPQVVTIHITPVDDQLPKEAPGVSRHLVVKETEVA
YITKKHLHFIDTESQDRELLYTITAPPFFSSSHRHLDAGKLFMVDSIPRLTKTPAAPGLK
YFTQHAVNHMKVAYMPPMQDVGPHPRHVQFGFSVSNQHGGTLYGICFNITILPVDNQAPK
VFTKPLRVVEGGQCVISTEHVLVSDEDTEPDNVHLSLQSPPQHGTVELDGIPLNTGATFS
WGDLQALKLRYQHDGSEEFQDDILLQVTDGTNTAEYVLHVEVFPVNDEPPVLKVDLIPMM
HCSEGEEVVITSEYIFATDVDSDDLKLMFVIVGEPQHGTVRRAGVRVHQFSQEDVVAGAV
TYKHTGGEIGLMPCFDTITLVVSDREAGPFVNGCCYKGPHPSVPLHESFPMYDLNITVYP
VDNQPPSVAIGTMFVVDEGFSAALTVNHLSAADPDTAADDLEFVLVSPPQFGYLENTLPS
AGFEKSNMGISIASFQWKDMKALHINYVQSRHLGMEPTADKFVLYVTDGKRRSMEIPFYI
TINATNDEAPDFIVQNITVCEGQMRELDSSIISATDQDIPKNPLLFSITHKPRHGLLINK
AFSRNFFQYKQSANPGQKHELVYNFSMELLKNGMRLMYVHDDSESLTDDFTIQVSDGKHK
ILKTIFVEVTPVNDEKPMLSKKAEITMNMGETRIISSAVLSAIDEDSPREKIYYLFERLP
QNGQLQLKIGRDWVPLYPGMKCTQEEVDLNLLRYTHTGAMDSKNQDSFTFHLWDGDNRSP
AFDCHITIKDMGKGDIVILAKPLVVSKGGRGFLTTTTLLAVDGTDKPEELLYVITSPPQF
GQVEYVRYPGVPITSFSQMDIAGQTVCYVDKSTTAAHRDTFRFIISNGLQTKPGVFEITL
ETVDTALPVVTRNKGLRLVEGATGLLSPDLLQLTDPDTPAEKLTFLLAQLPRHGQLYLQG
MVLIPRNFTQLDVDSGHVAYRHLGGDSRTDHFTFVATDRTNHGFLVDGRLWQEPVSFTIQ
VDQVDKAAPRITHLHSPSQVGLLKNGCYGIYITSRVLKASDPDTDDNQIIFKILRGPQHG
HLENSVTGEFIHEKFSQKDLNSKTILYIINPSLEVNSDTMEFQVMDPTGNSATPQSLELK
WSHIEWSQTEYEVCENMGMLPLEITRRGYSMDSAFVSVQVNQMSATVGKDFTMTPSKLVQ
FDPGMSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKTAVKILDSKGGQCHPSY
AFSPNMPTAGEKGVRHLLSPGASSPTTSGVFHLERRPLPASEQLTVTRGDALRDFGSEEL
SPVKLRTRGDGKTVPPSSVYRNRTDIIYNYHGMISLKLEDDSSPARRRKANISIISEPQK
TTKAAEPPQADKEESTTSSHFPRQDPLPSFPKNCTLELKELFHFEESLRKLYKCDGIAWR
SWSPRTKEVEDKSCPAGWHRHSGYCHSLITEQKGTWTTAAQACREHHQGSLVTVISRQHM
RWLWDISGRKPFWIGLNDRVRAGHWEWIGGEPVTFTNWRRGPPQRSRHGKDCVLVQRPGK
WHTKDCRKGKSHNYVCSRKL
NT seq
6543 nt
NT seq
+upstream
nt +downstream
nt
atgagctctccgagctggggtgggcttggtgccctgctcctgctgctgctgctcccaggc
tgggccagccccacctttgtccgtgttaaccaaggggtcagggtgatgaagggcagttcc
gccttcctgtctcaagatgacctgaagttcaccatccccaaagagaaagatgcctgcaaa
gtggaagtcgtgatgaatgagccaataacccagagggttgggaaacttactccacaggtc
tttgactgccatttccttcccaatgaagtaaaatatactcataatggttgcccaattctt
gatgaagacacagtgaagcttagactctacaggtttactgagacagacaccttcacggaa
acctttaccctgcgggtctacctcctggaaccagactgtaacatcatccgcgtgagtgat
gatgcactggaggtgtctgagttctacggcctgtcccgagtcattgataagaacctgctc
aggtttgattacgagaggatggccagcctggaatgcacagtcagactggaccctgtggga
actcagctgccagcccacggccagctggttctggtggagccccagctggaagaacctcgt
ggagatcagccacatagtttcttccctgagtctcaattggggacagaactgaagtgtcca
ggtggcaggtgtaccctgggactgaagaaagtcggaagtctcaaagtgagctgtgaggag
ttcctgctgatggggcttcgataccaacacctgagttccccttctcccaacattgattac
ttctccatccaactggacctcacagatagcaggagtaaaatcacatacaagtcagagcgc
gcgtggctgcctgtctatatcagacctggaattcccaatcagattccaagagctgcattc
atggccatgtttattctggaagtggatcagttcatcctgacctcactgactacatcggtt
ctggactgtgaagaggatgagacccccaaacccttgctggtgttcaacattactaaagct
ccgctccagggctatgtgactcacctgtgggatcacaccagaccagtgtcctccttcacc
tggaaggatctaagagatatgcagattgcctatcagccaccaaacagcagccattctgag
aggagactttatgaggtggagttggaggtctatgacttcttctttgagaagagcgcacct
attacagtccacatcgccatcagaacagcagatacaaatgccccgcgagtgtcctggaac
acaggtctgaatctcctggagggacagtctagggccatcacatgggagcagtttcagatt
gtggacaatgatgacattcatgctgtccaggtagtcactgtggatggcctgcagcacgga
cggcttactgtgagaggggggaaagggtttctcttcactgtggctgaccttcaggctgga
gtcgttcgatatcaccatgatgacagtgactccaccaaagactttgtggtcttcaggata
tttgacagccaacacagcatccaacataagtttcccatcaacatcttgcccaaagatgac
agtccaccattcctcataacaaatgttgtgattgaactggaagaggggcagaccatacta
atccagggttccatgctgagagcttcagacgtggactccagtgatgactacatcttcttt
aatatcacgaaacccccacaagctggagagatcatgaagaaaccagcgccaggactgata
ggctatccagtccctggcttcattcagagggatctgttcaatggcatcatttactatcgt
cactttggtggagaaatctttgaagattcatttgaatttgtcctgtgggacagccacgaa
cctccaaatctctcagtgccacaggtggtgacaatccatatcactccagtagatgaccag
cttccaaaagaggctcccggagtttctcggcatttagttgtcaaggaaacagaggtggcc
tacatcactaagaaacatctacattttatagatacagaatcacaagacagggagctgctc
tacacaataaccgctcctccgtttttctcctccagccacagacacttagatgctgggaaa
ttattcatggtggacagcataccaaggctaaccaagactcctgcagctccagggttaaaa
tatttcactcagcacgctgtgaaccatatgaaagtggcctacatgccacccatgcaagat
gtaggtccgcatccaagacacgtccagtttggcttttccgtcagtaaccagcacggtggg
acgctatatgggatctgctttaatatcacgattcttccggtggacaatcaggccccaaag
gtgtttaccaaacctctgagagtggttgagggaggtcaatgtgtcatcagcacagagcat
gtcctggtttctgacgaggacaccgaaccggacaacgtccacctctccttgcagagtccg
cctcagcatggaacggtggagctagatggaatccctctaaacacaggagccacgttttct
tggggagacctccaggccttaaaacttagatatcagcatgatggatctgaggaatttcag
gatgacatactactgcaggtcacagatggcacaaatacagctgagtatgttctacacgtt
gaggtgttccctgtaaatgatgagccaccagtgctaaaggtggacctcattcccatgatg
cattgctccgagggtgaagaggtggtcatcacttctgaatacatttttgctactgatgtg
gacagtgatgatctgaagctaatgttcgtgattgttggagaacctcagcatgggactgtg
aggagagctggggttagggtacatcagttctctcaggaagatgttgtcgcaggggctgtg
acgtacaaacacacaggtggtgagattggcctgatgccttgtttcgacaccattacattg
gtggtttcggacagagaagctggtccttttgtgaatggctgctgttacaaagggcctcat
ccatctgttcctcttcatgagtcctttccaatgtatgatctcaacatcacagtgtatcca
gtggacaaccaaccgccttcagttgccataggtaccatgttcgttgtggatgagggtttc
tcagcagcccttactgttaaccatttgtctgccgctgatcctgacactgcagcagatgac
ttggaatttgttttggtttctcctccccagtttggctaccttgaaaacacactcccttct
gcaggttttgaaaagagcaatatgggcatcagcatagcttcgtttcagtggaaagacatg
aaggctttgcatattaactatgtgcagtccaggcatctggggatggaaccaacggctgac
aagtttgtgttgtatgtcactgatgggaagcgacgctccatggagataccattttacatt
acaatcaatgctacgaatgatgaagctcctgattttatagtgcagaatattactgtctgt
gagggtcagatgagagagctggattcttccatcatcagtgctactgaccaggacattccc
aagaaccccttgctgttcagtatcactcacaaaccacgtcatggcctcctcatcaacaag
gcatttagcagaaacttttttcaatataagcaatcagccaaccccggccagaagcatgaa
cttgtctacaacttttccatggaacttctcaagaatggaatgaggctgatgtacgtgcac
gatgattcagagagtctgactgatgactttacaatccaggtgtcagacgggaaacataag
atacttaaaaccatttttgtagaggtcaccccagttaatgatgagaaaccaatgctgagc
aagaaggctgaaattacaatgaatatgggtgaaactcggattatttctagtgctgttctc
tcagccatagatgaagactcacccagggagaagatttactatttatttgaaagacttccc
caaaatgggcaacttcaacttaagatagggagggactgggtccctctgtaccctggcatg
aaatgcactcaggaagaagtggatttgaacttgctgagatatacacacaccggggccatg
gactccaagaaccaagacagcttcaccttccacctctgggatggtgacaataggtcgccg
gcatttgactgtcacatcaccatcaaggatatgggaaaaggtgatattgtcatcctggca
aaaccacttgtggtgtctaaaggtggcagaggtttcctgacgaccaccactctccttgct
gtggatggaacagacaagcccgaggaacttctctacgtcatcacctccccaccgcaattt
ggccaggttgaatacgtccgctatcctggggtccccattacaagcttcagccaaatggat
atagcaggacagacagtctgctatgtggataagagcacaacagctgcccacagagacaca
ttcagattcatcatcagcaatggacttcagaccaagcctggggtttttgagatcacactg
gagactgtggacacagccttacccgtggtgaccaggaacaaggggttgagactggttgaa
ggggccacaggcctgctctcccctgacctcctgcagctgaccgaccctgacactccagcc
gaaaagctcaccttccttctggcccagctcccacggcatggccagctctacctgcaaggg
atggtgctgatcccacgcaatttcactcagctggacgtggacagcgggcatgtggcctat
cggcacttgggaggggattctcggactgaccatttcacttttgtggccacagataggaca
aaccacggctttcttgtggatgggagactgtggcaagaacctgtatcattcaccatccag
gtggaccaggtggacaaagcggcccctcgcatcacacacttgcattccccttctcaagta
gggctcttgaaaaatggttgttatgggatttacatcacttcccgtgtgttgaaggcatca
gaccctgacaccgatgataaccagatcatctttaagattttacgaggcccccaacatggg
catctggagaactcagtgacaggtgaatttatccatgagaaatttagccagaaggactta
aacagtaagaccattctttacatcataaacccatctttggaagtaaattcagataccatg
gaatttcaagtcatggatcccacagggaactccgccactcctcaaagtttggaactgaag
tggtctcatattgagtggtcacagactgaatatgaggtctgtgagaatatgggcatgctg
cccttggaaattaccagaaggggatattccatggactcagcctttgtgagtgtacaggtc
aaccaaatgtcagctacagttggaaaggatttcaccatgactccatctaagctggttcag
tttgacccaggaatgtcaactaagatgtggaatatagcaattacctatgacggattagag
gaagatgatgaggtctttgaagtaattctgaactcccctgtgaatgcggttcttggcaca
aagacaaaaactgcagtgaaaattttggactcaaaaggagggcagtgccatccttcatat
gccttcagtccaaacatgcccactgcaggggagaagggcgttcggcacctgctctcccca
ggggcttcctcacccaccacttctggtgtctttcatctggaaagaagaccccttccagct
tccgagcagctaacagtcaccaggggtgacgccctgcgggactttggttctgaagaactt
tctccagtgaagcttaggacccgaggcgacggcaaaacagttcctccatcctccgtttat
agaaatagaacagacatcatctataattatcatgggatgatttccctgaaactggaagat
gacagctccccagctcgcagaaggaaggccaacatatccattattagtgagccccaaaag
acaaccaaagcggcagaacctcctcaagccgataaggaggaatccacaaccagctcacac
ttccccagacaggacccgttgccctcattcccaaagaactgcacgctggaattaaaggaa
ctcttccactttgaagaaagcctccgaaaactgtacaagtgtgatggaattgcctggaga
tcctggagcccccgcaccaaggaggtggaagataaatcctgccccgctgggtggcaccgt
cattcaggctactgccactccttgatcacagagcagaaaggcacatggaccacagctgcc
caagcttgcagggaacatcaccagggcagccttgtaactgtcatctccaggcagcacatg
cgatggctttgggacatcagtggaagaaagccgttttggataggtttgaatgaccgagtg
cgtgctggccactgggagtggattggcggtgaacctgtgaccttcaccaactggaggaga
gggccccctcaacgttcaaggcatggcaaggactgtgttttggttcaaaggccaggaaaa
tggcacacaaaggactgtaggaagggaaaatctcacaattatgtgtgctccaggaaactc
taa
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