Calycomorphotria hydatis: V22_32960
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Entry
V22_32960 CDS
T09810
Symbol
rlmN
Name
(GenBank) putative dual-specificity RNA methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
chya
Calycomorphotria hydatis
Brite
KEGG Orthology (KO) [BR:
chya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chya03009
]
V22_32960 (rlmN)
Enzymes [BR:
chya01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
V22_32960 (rlmN)
Ribosome biogenesis [BR:
chya03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
V22_32960 (rlmN)
BRITE hierarchy
Motif
Pfam:
Radical_SAM
RlmN_N
Radical_SAM_2
Slx4
Motif
Other DBs
NCBI-ProteinID:
QDT66032
UniProt:
A0A517TCC6
LinkDB
All DBs
Position
3917092..3918183
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AA seq
363 aa
AA seq
DB search
MSAADATNVATNTILSFDPDQLRQWCDDQGFGGYRAQQIRKRIFSGRATDFDEMKELPAK
AREALKSEFALFTSKIVDHRIASDRTEKLLLELPDKQLVECVLMRETNRRTACISTQVGC
AMGCVFCASGLLGVKRNLTSAEILEQLLRIDRLLEPGERLSNIVVMGIGEPLANLKSLIP
ALEEVHREDGLALGARRITISTVGLPAQMRELAEKPHQWNLAVSLHAPNDELRTKLVPVN
KSTGIKEILAAADEYFDKTGRRVTYEYVLLGGINDEAEHAKELAGLLSRRNAHVNLIPMN
GVTELPFGAPTEPGTQQFRAILEQNGVPTTVRKRKGADIDAACGQLRLNREQESQGNALP
VIQ
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgctgctgatgcgaccaatgtcgcaaccaataccatcttatctttcgaccctgat
caacttcgccaatggtgtgatgatcaaggcttcggcggttatcgcgcccagcagattcgg
aagcggatcttctccggtcgggcaaccgactttgatgagatgaaggaactgcccgcgaaa
gctcgcgaggccctgaagtccgaattcgcactcttcaccagcaaaatcgtcgatcaccgt
atcgccagtgatcgtaccgagaaactgcttcttgaacttcccgacaagcaacttgtcgaa
tgcgtactgatgcgcgaaacaaatcggcgaaccgcctgcatcagcactcaagtcggctgt
gcgatgggctgcgtcttctgcgcgagtggcttattgggagtgaagagaaatctcacctcc
gcagaaattcttgagcaattgctccgtattgatcgactccttgagcccggcgagcgactg
tccaacatcgtggtgatgggcattggcgaaccgctggcgaatctgaagtcgttaatcccc
gctttggaagaggtccaccgggaagacggacttgcgttgggagcacggcgaatcacgatt
tccaccgtcggccttccggcacaaatgcgagaactggctgagaaacctcatcaatggaat
ctggccgtgtcgctgcatgcaccgaacgatgaactgcgtacaaaactggttccggtgaat
aaatcgaccggcatcaaggaaatccttgccgcggcggatgagtactttgacaaaaccggt
cggcgggtgacctacgaatatgtcttgctcggtggcatcaacgatgaagcagaacacgcc
aaagaactcgccggattgctttcccgcaggaatgctcacgtcaacctgataccaatgaac
ggcgtgacggaactccctttcggtgcccccacagagcctggaacgcagcagttccgtgcg
atcctggaacaaaacggagttccgacgaccgtgcggaaacgcaagggggcagatatcgat
gccgcctgtgggcaattacggctcaaccgcgaacaggaatctcaaggcaacgctttgcct
gtcattcaataa
DBGET
integrated database retrieval system
