Citrus x clementina (clementine): CICLE_v10004226mg
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Entry
CICLE_v10004226mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
CICLE_v10004226mg
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cic01002
]
CICLE_v10004226mg
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10004226mg
Enzymes [BR:
cic01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
CICLE_v10004226mg
Peptidases and inhibitors [BR:
cic01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
CICLE_v10004226mg
Ubiquitin system [BR:
cic04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
CICLE_v10004226mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Pox_RNA_Pol_19
UPF1_Zn_bind
Ribosomal_L37ae
Motif
Other DBs
NCBI-GeneID:
18032764
NCBI-ProteinID:
XP_006420922
UniProt:
V4RJD6
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MGKRAERKSRAAAAKQKQAAARAPKSVLQQSKPVESTDDGVPVMKERKPCPHLDKGIDSD
KISVKIGSSDPIRCEDCREGVGDRRGKKGKGKHGKKKGSSLVDSKAIWVCLGCGHYACGG
VGLPTTPQSHVVRHARQTRHPLVIQWENPHLRWCFPCNTLIPVEKTEENGENKDALSEVV
KLIKGRSTEISSVDVEDAWFGSGNVNSEIKSESTVVSGSDLDGNACYVVRGLANLGNTCF
FNSVMQNLLAMSQLQDYFLNAELTFGPLTIALKKLFAETKPETGLRNVINPRSFFGCICS
KAPQFKGYQQHDSHELLRCLLDGLCSEELAFRKRNSPSEGNGISSNQGPVFVDYVFGGQI
ASTVRCVECGHSSTVYEPFLDLSLPVPTKKAPSKKTQPASRAKKTKLPPKKSGRIRSKGT
KDTHAVITQSISNLSISSKSQSLTESTAPLSENVVSSSGGSQLLDSVGSPTVATQCGSAL
QNVPADPLPQHDQVIDIPVEQTVASLDDFWLDYIEPKTTGDVLDSTWQKSDVSVIQDSTD
FAWLDYIEPETISDEHGLTLQNNDVLFVQDSGEKNEVSDDSLINSNQIPLLDSKPNLQAD
SSSGDAGEDELPLVVQDSEVILLPYNEEISTTAEKISGEGEASSSVVGCRQEEVDFDGFG
DLFNEPETAIGPVPRPSSGTESVGSGFVVGNSSDSDPDEVDDSDSPVSVESCLVHFIKPE
LLTDDNAWDCESCSKTLQRQKLEALKRRAKLASKPLINGGETSNQNDIQGSSLTDVDSLC
NGDAKTNNDLNTFCESLVSQSGKTDCFNQDCAEVESGLTNDVNPAVPQREKGKMKINDAV
EMQSRSLCLRDSCSEESITDQDEGSCSVDGATSSGYSAEKVYQSDSQLVAGNCESEESKV
EEINSKIVKVKRDATKRVLINKAPPILTIHLKRFSQDARGRLSKLNGHVNFSEIINLRPY
MDPGCTDHDNYDYRLVGVVEHLGTMRGGHYVAYVRGGPKNKVKAKKESVGGVWYHASDVY
VREVSLEEVLRCEAYILFYEKI
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagggctgagaggaagagtagagctgctgctgctaagcagaagcaggctgct
gcccgtgctcctaagagtgttcttcaacaatcaaaacctgttgagagtactgatgatgga
gttccggtcatgaaagagagaaaaccatgcccccatcttgacaagggtattgattcagat
aaaatttcagttaaaattgggtcttcagatcctattagatgcgaagattgtagagaaggt
gtaggtgatagacgagggaagaagggaaagggtaaacatggtaagaagaagggcagttcc
ttggtggattcaaaagcaatttgggtttgcttaggttgtggacattatgcttgtggaggg
gtcggacttcctacaacccctcaaagccacgtggttcggcatgctagacaaacccgtcat
cccttggtgatccaatgggaaaatcctcatctccggtggtgcttcccatgcaatacactc
attccagttgaaaaaacggaggaaaatggtgaaaataaagatgctttatcggaggttgta
aaattaattaaggggcgatctacagaaatttcatcggtggatgttgaggatgcttggttt
ggaagtggcaacgtcaatagtgaaatcaaatctgaaagtaccgtagtgagtgggagtgac
ttagatggaaatgcttgttatgtggtaagagggttggctaatcttggaaacacttgcttc
ttcaattcagtgatgcaaaatcttcttgccatgagtcagttgcaggattacttcttgaat
gcggagttaacttttggacctcttactatcgctttgaagaagctttttgctgaaacaaaa
ccagagacgggattgagaaatgtgataaatccaagatccttttttgggtgcatctgttcc
aaggctccccaattcaagggatatcagcagcatgacagccatgaattgcttcgttgctta
cttgatggactgtgtagcgaggagttggccttcagaaaaagaaatagcccttccgaggga
aatggaatttcctcaaatcagggtcctgtttttgtggattatgtgtttggaggccaaatt
gctagtactgttcgttgtgtggaatgtggacattcctcaacagtgtatgagccattttta
gatctttcccttccggttcctacaaagaaagctccatctaagaagactcaacccgcctct
cgagccaagaaaactaaactgccgccaaagaaaagtggaagaattcgatctaaaggtacc
aaagatactcatgcagtaataacacaaagtatttcaaatctatcaatcagcagcaagtct
caaagcctgacggagtctactgcacctcttagtgaaaatgtggtgagttcttctggcggt
tctcaattactagattcagttggctcacctaccgtggccacccaatgtggttcagcttta
cagaatgtcccagctgatccactccctcagcatgaccaagttattgatattccagttgaa
caaacagtggcttcattggatgatttttggttggattacattgaacctaaaactactgga
gatgtgctggattcgacttggcaaaagagtgatgtgtcagttattcaagattctacagat
tttgcatggttggattacattgaaccagaaactatatcagatgagcatggcttgactttg
caaaataatgatgttttgtttgttcaagattctggagagaagaatgaggtgtcagatgat
tctttaattaattctaatcagattcccttacttgattcaaagccaaatctacaagcagat
tcttcttctggggatgctggcgaggatgagctaccactagtggttcaagattcagaagtt
atcttgcttccatacaatgaagaaatttcaactactgcagagaaaataagtggagaaggt
gaggcctcctcatcagttgtgggctgtagacaagaggaagtggactttgatggttttggt
gacttatttaatgagcctgagactgctataggaccagttccaaggccatcttcgggtact
gaaagtgtggggagtggttttgtagtaggaaacagcagtgactccgatccagatgaggtt
gatgattcagattctccagtgtctgttgagagctgtttggttcatttcataaaaccagag
cttctcactgatgataatgcttgggattgtgagagctgttcaaagactctgcaacgccag
aagttggaagctttgaagaggagggccaaacttgcttctaaacctttgatcaatggaggt
gaaaccagcaaccaaaatgatatacagggttcaagtcttacggatgttgacagtctttgt
aatggagatgccaaaactaataatgatctgaacactttctgtgaaagcttggtttcgcag
agtgggaagactgattgttttaatcaagattgtgcagaagttgaaagtggcctaacaaat
gacgtgaatccagctgttccgcaaagggaaaagggaaaaatgaagattaatgatgcagtg
gaaatgcaatcacgttctttgtgtttgcgtgattcttgcagtgaagaaagcattactgat
caagatgaaggttcttgtagtgttgatggggctactagtagtgggtattctgcggaaaaa
gtttaccagagtgattctcagcttgttgctggaaactgtgaatcagaggaaagcaaagtt
gaggagataaattccaaaattgtaaaagtgaagagagatgcaaccaaaagagtacttata
aataaggctccacctattttgaccattcatctaaagaggttcagccaggatgcccgtggt
cgcttgagtaaattgaatggccatgtcaatttcagtgaaataatcaatcttagaccttat
atggatcccgggtgcacagaccatgataactatgattatcgtctagttggcgtagtggag
catttgggaaccatgagaggtggtcactatgttgcatatgtgagaggaggtccaaaaaat
aaagttaaggccaagaaagaaagtgttggtggtgtatggtatcacgctagtgatgtctat
gttcgtgaagtttctctggaagaagttcttcgctgtgaggcatacatcttattctatgaa
aaaatttga
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