KEGG   Citrus x clementina (clementine): CICLE_v10029823mg
Entry
CICLE_v10029823mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03082  ATP-dependent chromatin remodeling
cic03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CICLE_v10029823mg
   03083 Polycomb repressive complex
    CICLE_v10029823mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cic03036]
    CICLE_v10029823mg
Enzymes [BR:cic01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     CICLE_v10029823mg
Chromosome and associated proteins [BR:cic03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     CICLE_v10029823mg
   HDAC complexes
    Sin3A-HDAC complex
     CICLE_v10029823mg
    BRAF-HDAC complex
     CICLE_v10029823mg
    REST complex
     CICLE_v10029823mg
    SHIP complex
     CICLE_v10029823mg
    MiDAC complex
     CICLE_v10029823mg
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     CICLE_v10029823mg
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    CICLE_v10029823mg
  Chromatin remodeling factors
   NuRD complex
    CICLE_v10029823mg
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 18034716
NCBI-ProteinID: XP_006424306
UniProt: V4SKE1
LinkDB
Position
Unknown
AA seq 429 aa
MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT
IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIK
MQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGD
NDNDHMDVG
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgcgctccaaggacaaaatctcctacttttacgacggagatgtgggcagtgtgtatttt
gggcctaaccatccaatgaaaccgcatcggctctgtatgacacaccatctggttctctcc
tatgatcttcacaagaagatggaaatatatcggccacataaggcatacccagtggagctt
gcacagttccattcggctgattatgttgaatttttacatcggattacaccggacactcaa
catctattccgacaagaattaactaaatataatcttggagaagattgcccagtctttgaa
aacttgtttgaattttgtcaaatttatgctggtggaacaatagatgctgcacgtagatta
aacaatcagctctgtgatattgctataaattgggctggtggcttacaccatgctaagaag
tgcgaagcatccggtttttgttacattaatgacttggttttggggatcctggagctcttg
aaatatcatgctcgtgtgttgtatattgatatcgacgtgcatcacggtgatggagttgaa
gaagccttttatttcactgacagggtgatgactgttagttttcacaagttcggggatctg
ttctttcctggaactggtgatgttaaggaaataggagaaagagaaggcaagttttacgct
ataaatgtcccgctcaaggatggaattgatgacactagcttcactcgacttttcaagaca
attatttccaaggttgttgaaacatatgcaccaggtgccatagttcttcaatgcggggca
gattctcttgctggggatcgcttgggctgcttcaatctctccattgatggtcatgctgaa
tgtgttcgatttgtcaagaaattcaatctccccttactggtcactggaggtggcggatac
actaaagaaaatgttgctcggtgttggactgttgaaacaggaattcttttagatacagag
cttcccaatgaaattccagaaaatgaatatatcaagtattttgcccccgagtgttcattg
agaattccaaatggacacatagagaatttgaatagcaaatcatatcttagcacgattaaa
atgcaagtactagaaaatcttcgttccatacaacatgctccaagtgttcagatgcaagag
gttccacccgacttctatattcctgaatttgatgaagatgagcagaaccctgatgaacga
atggatcagcacactcaagacaagcaaatccagcgtgatgatgaattctacgaaggagac
aatgataatgatcacatggacgttgggtaa

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