Citrus x clementina (clementine): CICLE_v10029823mg
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Entry
CICLE_v10029823mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03082
ATP-dependent chromatin remodeling
cic03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CICLE_v10029823mg
03083 Polycomb repressive complex
CICLE_v10029823mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10029823mg
Enzymes [BR:
cic01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CICLE_v10029823mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
CICLE_v10029823mg
HDAC complexes
Sin3A-HDAC complex
CICLE_v10029823mg
BRAF-HDAC complex
CICLE_v10029823mg
REST complex
CICLE_v10029823mg
SHIP complex
CICLE_v10029823mg
MiDAC complex
CICLE_v10029823mg
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
CICLE_v10029823mg
Heterochromatin formation proteins
Other heterochromatin formation proteins
CICLE_v10029823mg
Chromatin remodeling factors
NuRD complex
CICLE_v10029823mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
18034716
NCBI-ProteinID:
XP_006424306
UniProt:
V4SKE1
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT
IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIK
MQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGD
NDNDHMDVG
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccaaggacaaaatctcctacttttacgacggagatgtgggcagtgtgtatttt
gggcctaaccatccaatgaaaccgcatcggctctgtatgacacaccatctggttctctcc
tatgatcttcacaagaagatggaaatatatcggccacataaggcatacccagtggagctt
gcacagttccattcggctgattatgttgaatttttacatcggattacaccggacactcaa
catctattccgacaagaattaactaaatataatcttggagaagattgcccagtctttgaa
aacttgtttgaattttgtcaaatttatgctggtggaacaatagatgctgcacgtagatta
aacaatcagctctgtgatattgctataaattgggctggtggcttacaccatgctaagaag
tgcgaagcatccggtttttgttacattaatgacttggttttggggatcctggagctcttg
aaatatcatgctcgtgtgttgtatattgatatcgacgtgcatcacggtgatggagttgaa
gaagccttttatttcactgacagggtgatgactgttagttttcacaagttcggggatctg
ttctttcctggaactggtgatgttaaggaaataggagaaagagaaggcaagttttacgct
ataaatgtcccgctcaaggatggaattgatgacactagcttcactcgacttttcaagaca
attatttccaaggttgttgaaacatatgcaccaggtgccatagttcttcaatgcggggca
gattctcttgctggggatcgcttgggctgcttcaatctctccattgatggtcatgctgaa
tgtgttcgatttgtcaagaaattcaatctccccttactggtcactggaggtggcggatac
actaaagaaaatgttgctcggtgttggactgttgaaacaggaattcttttagatacagag
cttcccaatgaaattccagaaaatgaatatatcaagtattttgcccccgagtgttcattg
agaattccaaatggacacatagagaatttgaatagcaaatcatatcttagcacgattaaa
atgcaagtactagaaaatcttcgttccatacaacatgctccaagtgttcagatgcaagag
gttccacccgacttctatattcctgaatttgatgaagatgagcagaaccctgatgaacga
atggatcagcacactcaagacaagcaaatccagcgtgatgatgaattctacgaaggagac
aatgataatgatcacatggacgttgggtaa
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