Ctenopharyngodon idella (grass carp): 127495658
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Entry
127495658 CDS
T08802
Name
(RefSeq) finTRIM family, member 16 isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127495658
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127495658
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
DUF3829
DUF445
DUF4407
Relaxase_C
Motif
Other DBs
NCBI-GeneID:
127495658
NCBI-ProteinID:
XP_051718566
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Position
2:complement(34248901..34251781)
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AA seq
559 aa
AA seq
DB search
MAKSSVSLAQDQFSCPICLDLLKDPVTIPCGHSYCMSCITGCWDQDDQKGVYSCPQCRQT
FTPRPVLGKNTMLAEVVEKLKQTKLQAARPVQCYTGSGDVECDICTGDKNKAIKSCLVCL
NSYCQNHLEQHESFFRSKRHNLMDATGQLQEMICLQHEKLLEIYCRSDKKCICLLCLVDE
HKNHETVSAAAERNEKQRQLEEIQRKFRQRIQERQKELEELREAVESHKRSGQAAVEDSE
RIFTELIRSIERSRSEVTQLIRDQEKAAVSQAEGILERLEQEIDDLKRRDAELEQLSHTD
HHIHFLQSFQTLSVPPGSTDSSSITVSSRLSFDDVGKSVSHLREKLEHFCREEIEKITDM
VKYIEFVSTPEPKTREEFLQYSRRFTLDANTVHKYLCLSEENRMITETNTDQLYPDHPDR
FDSRPQVLCRERVCGRCYWEVEWSGRGVCISVSYKSISRKGQGDECAFGYNDKSWSLYCF
PFSYCKYSFCHNYTETELPLAVSSSCRIGVYVDHSAGTLSFYSVSDTMTLIHRVHTTFTQ
PLYPGFSVIGSVKLCDITK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatccagtgtttctttggctcaggatcagttcagttgtccaatctgtctggat
ctactgaaggatccagtgaccattccctgtggacacagttactgtatgagctgtattaca
ggctgctgggatcaggatgatcagaagggagtctacagctgtcctcagtgcagacagacc
ttcactccaagacctgttttaggtaaaaacaccatgctggctgaagtggtggagaaactc
aagcagacaaaactacaagctgctcgtcctgtacaatgttacactggatctggagatgtg
gagtgtgacatctgtactggggacaaaaacaaagccatcaagtcctgtctggtgtgtctg
aactcttactgtcaaaatcatcttgaacaacatgagagtttcttcagaagtaagagacac
aatctaatggacgccactggacaacttcaggagatgatctgccttcaacatgagaaactc
ctggagatttactgccgtagtgacaagaagtgcatttgtttgctttgtttggtggatgaa
cacaaaaaccatgagactgtatcagcggcagcagagaggaatgagaaacagagacagttg
gaagaaatccagagaaaatttcgccagagaatccaggagagacagaaggagcttgaggag
ctgagagaggctgtggagtctcacaagcgctctggacaggcagcagtggaggacagtgag
aggatctttactgagctgatccgctccattgagagaagccgctctgaggtgacacagctg
atcagagaccaggaaaaggctgcagtgagtcaagctgaaggaatactggagcgactggag
caggagattgatgatctgaagaggagagacgctgagctggagcagctttcacacacagac
catcacatccatttcctccagagtttccagactctctctgtccctcctggatctacagac
tcatccagcatcacggtcagttctcgtctctcttttgatgatgttggtaaatctgtgtct
catctgagagagaaactggagcatttctgcagagaggagatagaaaagataactgatatg
gtaaaatacatcgagtttgtatccacccctgaacccaagacaagggaggagtttctacaa
tattcccgtcggttcaccctggatgcaaacacagtgcataaatacctatgtttgtccgag
gagaacagaatgattactgaaactaacacagaccagctgtatcctgatcatccagacaga
tttgatagtcgtcctcaggtgttgtgtagagagagagtgtgtggacgctgttactgggag
gttgagtggagtgggagaggagtgtgtatatcagtgtcatataagagcatcagcaggaag
ggacagggagatgaatgtgcatttggatataatgataagtcttggagtttgtattgcttt
cccttcagttactgcaaatactcattctgtcacaattacacagagactgaactcccttta
gcagtctccagctcctgtagaataggagtgtatgtggatcacagtgcaggaactctgtct
ttctacagcgtctctgacacaatgactctcattcacagagtccacaccacattcactcag
cctctctatcctgggtttagcgttattggatcagtgaaactgtgtgatattactaaatag
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