Ctenopharyngodon idella (grass carp): 127496116
Help
Entry
127496116 CDS
T08802
Name
(RefSeq) receptor-type tyrosine-protein phosphatase S isoform X1
KO
K06778
receptor-type tyrosine-protein phosphatase S [EC:
3.1.3.48
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127496116
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cide01009
]
127496116
Enzymes [BR:
cide01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
127496116
Protein phosphatases and associated proteins [BR:
cide01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
127496116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
Ig_3
I-set
Ig_2
ig
Pur_ac_phosph_N
DSPc
fn3_2
Y_phosphatase3
PTPlike_phytase
V-set
Tissue_fac
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
127496116
NCBI-ProteinID:
XP_051719715
LinkDB
All DBs
Position
2:42516502..42589821
Genome browser
AA seq
1530 aa
AA seq
DB search
MAVQIGRGPVLPVLLLLFICLQNSCDALSAPVFVKIPTDQIGVSGGVVSFVCQATGDPKP
QVFWNKKGKKVNSQRIETIEFDEGAGAVLRIQPLRAPRDENAYECVAKNTEGEITKTSTL
SIIREDLLPFGFPSIDMGPQLKVVERTRTATMLCAASGIPDPEISWFKDFLPVEPALSQG
RIKQLRSGALQIERSEETDQGKYECVASNSQGVRYSSPANLYVRGMKHMRRVPPRFTILP
TSHEIMPGGSVNITCVAVGSPMPYVKWMLNSEDLTPEDEMPVGRNVLELNGVRESANYTC
VAMSSLGIIEAVAQVIVKSLPRAPGTPIVTETTPTSVTITWDSGNPDPVSYYIIQYRAKS
PDSKYETVDSITTTRYSIGGLYPNTEYEIRVSAVNTIGQGPSSNKVEARTGEQAPASPPR
NIQARIISQNAVMVRWDEPEEPNGLIKGYRVYYTMDPSQPMSNWQIHNVQDSMITTIHSL
VPSETYTIRVLAFTSVGDGPFSDPVHVKVRPGVPGQPGKFQVGKVTDTSVELTWEPAYSK
EPVKAYELIYKSPDLGVQEKRNFEPRTSYVVEGLRANTEYTFSLAAVSNKGIGAFTNEIN
QRTAQANVPRNFSVNLATKTSVLLTWEFPESSAPYRFTVEYNRQKMEVDARLRKAVIPNL
QPDTSYDFKITSPEGNMGGLRHRIHAKTSPPILIRRPEVDHTREAEATVTIILPSLDTRS
NVRNIYVVVVPLKRARGVIRHLKSPDEMDLEELLKDISQKQRDPRQRQVDLRRAYITARF
TPATLPAFFTLGNQQDYGGFENRALEAGQEYVFFILAELNSTTGKMFVASPYTDPVIAPD
SDPQPLDAGDGLIWVVGPVLAVVFIICIVIAILLYKKKQLFLDRKIIESEVKIQSDELQN
DLDETSKPDSKRKDSEPGTKCLLNNAEMMAHHPTDPVEMRRINFQTPGMMSHPPIPISDL
PEHTERLKANDNLHLSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHTRVVLAPA
DGIMGSDYINANYIDGYRKQNAYIATQGPLPETFGDFWRMVWEQRAASVVMMTKLEEKSR
IKCDQYWPSRGTDTYGAVQVTLLDTMELATFCVRTFSLHKSGSNERREVRQFQFTAWPDH
GVPEYPTPFLAFLRRVKACNPPDAGPVIVHCSAGVGRTGCFIVIDAMLERIRHERTVDVY
GHVTLMRSQRNYMVQTEDQYGFIHEALLEAVACGNTEVAARSLYSYIQTLSQVEAGEHVS
GMELEFKRLANTKAHTSRFVSANLPCNKFKNRLVNIMPYETTRVCLQPIRGLEGSDYINA
SFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAER
SARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFID
FIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGAVDIFQTVKMLRTQ
RPAMVQTEDEYQFCYQAGLEYLGSFDHYAT
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccagatcggcagaggtccggtcctcccggtgctgctgctcctcttcatctgc
ctgcagaactcctgcgacgccttgtcggcgccggtgttcgtgaagatccccacggatcag
atcggcgtgtccggtggagtcgtgtctttcgtgtgtcaggccacaggcgatccgaagcct
caggtgttctggaacaaaaagggcaagaaagtgaattcacagagaatagagaccatagag
tttgacgaaggggcgggggcggtgcttcgcatccagccactcagagcgccacgtgatgaa
aatgcttatgagtgtgtcgccaaaaacactgaaggagaaatcactaaaacctccacactg
tccatcatcagagaggacctgctgcccttcggcttccccagcatcgacatgggcccgcag
ctgaaggtggtggagagaaccagaaccgccaccatgctgtgcgccgccagcgggatcccc
gatcccgagatctcttggttcaaggacttcctccccgtggagccggcgctcagccaaggg
cgaatcaagcagctgcgatcaggtgcgctgcagatcgagcgcagtgaggagacggatcag
gggaagtacgagtgcgtggcgtctaactctcagggcgtgcgctactcgtcccctgctaac
ttatacgtgagaggtatgaaacacatgcgccgcgttccccctcgcttcaccatccttccc
accagccacgagatcatgccgggcgggagcgtgaacatcacctgtgtcgctgtcggttct
ccgatgccctatgtgaagtggatgctcaattcggaggacctgacgccggaggacgagatg
cccgtgggacgtaacgttctagagctgaacggcgtgcgagagtcggccaactacacctgc
gtcgccatgagcagcttgggaatcattgaggccgtggcgcaagttattgttaagtcttta
cccagagctcctggtacccccatcgtcacggagacgacccccaccagcgtcaccatcacc
tgggactctggtaaccctgaccccgtttcctattacatcatccagtaccgcgccaaatcc
ccagacagcaagtacgagacggtggactccatcaccaccacccgctacagcatcggtggc
ctctaccccaacactgagtacgagatccgcgtttctgccgtcaacaccatcggccagggt
ccgtccagcaacaaggtggaagctcgaactggagagcaagcccccgccagcccgccgcgg
aacatccaggcgcgcatcatatcccagaacgcagtgatggtgcgctgggacgagccggag
gagcccaacggtttgatcaaaggctatcgagtgtattacaccatggatccttcgcagcca
atgagcaactggcagatccacaatgttcaggacagcatgattacgaccatccacagcctc
gtgccgtccgagacgtacaccattcgtgtgctggcgttcacatctgtgggagatggaccc
ttctctgatcccgttcacgtcaaagtgagacctggagttcctgggcagccggggaagttc
caggttggtaaagtgaccgacaccagcgtggagttgacctgggaacctgcgtactccaaa
gagcccgtgaaagcctacgaactcatctacaaatctccagatctcggtgttcaggagaag
aggaattttgagcccaggacgtcgtatgtggtggagggtctgcgcgccaacaccgaatac
accttctctctggctgccgtttccaacaaaggcatcggagcattcaccaacgagatcaat
caacgcacggcgcaagcaaacgtgccgaggaatttctcagtgaatctggcgactaagacg
agtgtgttgctgacgtgggagtttccagagagcagcgccccctatcgcttcactgtggag
tacaaccggcagaagatggaggtggacgctcgtctgaggaaggcggttattccgaaccta
cagccggacaccagttatgacttcaagatcaccagccccgaggggaacatgggcggactc
agacaccgcatacacgccaagacctcaccgcccatcctgatccgccggcccgaggtggac
cacacgcgagaggccgaagccaccgtcaccatcatactgccgtcactggacaccaggagc
aacgtgaggaacatctatgtggtggtggttcctctgaagagagccagaggagtgattcgc
catctgaagagcccagacgagatggacctggaggagctgctgaaggacatcagtcagaag
cagcgagacccgcggcagcgtcaggtggacctgcggagagcttacatcacggcccgcttc
acgcccgccaccctgcccgccttcttcacgctgggcaaccagcaggactacggcggcttc
gagaaccgggccttagaggcgggtcaggagtacgtcttcttcatcctggctgagctcaac
tccaccaccgggaagatgtttgtggccagcccttacaccgaccccgtgatcgcgcccgac
tcggacccacagcctctggacgcgggcgacggcctcatctgggtggtgggacccgtcctg
gccgtggtcttcatcatctgcattgtcatcgccatcctgctctacaagaagaagcagcta
tttctggacaggaagataatagagtctgaggtgaagattcaatcagatgaactgcagaat
gatctggatgaaaccagtaaacccgacagcaaacgcaaggactctgagccgggaaccaaa
tgtctgctgaacaatgccgagatgatggctcaccatcccactgaccccgtggagatgaga
cgcatcaacttccagacaccaggtatgatgagtcacccgcccatccccatctctgatctg
cccgaacacacggagcgcctgaaggccaacgacaacctgcatctgtcgcaggagtacgag
tcgattgatcctggtcagcagttcacatgggaacattcaaacctggaggtgaacaagcca
aagaaccgctacgccaacgtgatcgcgtacgaccacacgcgtgtcgttctcgcaccggca
gacggcattatgggtagtgactacatcaacgcgaactacattgatggttacaggaagcag
aacgcatatattgccacccaggggccgctgccggagaccttcggtgatttctggcggatg
gtgtgggagcagagagccgcttcagtggtcatgatgactaaactagaggagaaatcacgg
atcaagtgtgatcagtactggcccagtcgcggcacggacacgtacggggcggttcaggtc
actctgctggacacgatggaactggccacattctgtgtgcgaaccttctctctgcataag
agcggctccaacgagaggagagaggtccggcagttccagttcacggcttggcccgaccac
ggtgttcccgaatatcccactccattcctggccttcctccgcagggtcaaagcgtgcaac
ccgccggacgccggtcccgtcatcgtccactgcagcgctggcgtgggccgcaccggctgc
ttcatagtgatcgacgccatgctggagcgcatccgtcacgagcggacggtggacgtgtac
ggtcacgtgaccctgatgcgctcgcagaggaactacatggtgcagacggaggatcagtac
ggcttcatccacgaggcgctgctggaggccgtggcctgcgggaacacggaggtggcggcg
cggagcctgtactcctacatacagacgctgtcgcaggtggaggcgggagaacacgtgagc
ggaatggagctggagttcaagcgtctggccaacactaaagcacacacctcccggttcgtc
agcgctaatctgccctgcaacaaattcaagaaccggctggtgaacatcatgccgtacgaa
accacacgcgtgtgtctgcagccaatcagaggcctggaagggtccgactatatcaacgcc
agcttcatcgacggatacaggcagcagaaggcgtatatcgcgacgcaggggccgctggcg
gagaccacggaggacttctggcggatgctgtgggaacacaactccaccatcgtggtgatg
ctgaccaaactgcgcgagatgggacgggagaagtgtcatcagtactggccggcggagcgt
tcggctcgatatcagtacttcgtggtggatcccatggcagaatacaacatgccgcagtac
atcctgagagagttcaaagtcaccgacgccagggatggacagtccagaaccgtcagacag
tttcagttcactgattggccagaacaaggtgttccaaagtcaggggagggtttcattgat
ttcattggacaggtgcataaaaccaaggagcagttcggtcaggatggaccaatcacagtg
cactgcagtgcgggcgtcgggcgcacaggtgtgttcatcactctcagtatcgtgctggag
cggatgcgttacgagggcgccgtcgacatcttccagaccgtcaaaatgctgcgcacacaa
cggccggcgatggtgcagactgaggacgagtatcagttctgctatcaggccggtctggag
taccttggaagttttgatcactatgcaacataa
DBGET
integrated database retrieval system
