Ctenopharyngodon idella (grass carp): 127498094
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Entry
127498094 CDS
T08802
Name
(RefSeq) gamma-2-syntrophin
KO
K24065
gamma-syntrophin
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127498094
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
127498094
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PH_17
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
127498094
NCBI-ProteinID:
XP_051723037
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Position
17:complement(20539622..20622949)
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AA seq
539 aa
AA seq
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MNAAAKHQPDLLERPASLLVPTWTKTGLALLYDEHTSNTYDVRLKLTKELLIIQKQDVVC
VNGGDSHLNHRTVVLRRQVTGGLGLSIKGGAEHKVPVVISKIFKDQVADQTGMLFIGDAV
LQVNGINVEKCTHEEVVHLLRTAGDEVTITVRYLREAPAFLKLPLGSPGPSSDQSSRASS
PLFDSGLHLNGNSSNTAPSSPSSPSANEPKYEKRWLDAVTLPLFMARISRRKAGTDKLRS
NSFEVIALDGVCTHVLQFCTAGESTDWLQAISTNINDLMQESIKTANKYCSPDDQIVHMG
WVCEQLQGSDADSTRGCRFLALRGSSLLIFRSPPVMASDWAQAEASFHLCEVLFKVHKLW
IAEDCWIQTKFYMGLQQDGELRDSEPFCFSVLVGHGQSFCYSVELGSELVLWEKTFQRAV
FMEVQRVRSKSYMCSSQGKILCFTVDFESGFSCSESVSKKTIWKYKFSQLKGSSDDGKTR
VKLLFQNSENKQIEMKELEFANLTAVLHCIHSFIAAKVATVDPVFVNNQSLTQKYMCSS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagccgccaaacatcagcctgatctgctagagagacccgccagcctcctggta
ccaacatggacaaaaaccggacttgcccttttgtacgatgaacacacaagtaacacctac
gacgttcgcttaaagttaacgaaagagctgttaatcatacagaagcaggatgtggtgtgt
gtaaacggtggcgactcccacttaaatcacagaactgttgtacttcgaagacaggtgact
ggaggtctcggtctgagtatcaaagggggagcagaacataaagtgcctgtggtcatctcg
aagattttcaaagatcaagtagccgatcagacggggatgctgtttataggcgacgccgtg
ttgcaggtcaatggcattaacgtggagaagtgtacacacgaggaagtcgttcatcttttg
cgaacggcaggggatgaagtcaccatcactgtacgttacctcagggaagcgccggccttc
ttaaaactcccattaggttcacccggaccgtccagcgatcagagtagcagagcgtcctcg
ccgcttttcgacagtggtttgcatttaaatgggaactcgagcaacacggccccgtcgtcg
ccctcctcaccttcggctaatgaaccaaagtatgagaaacgctggctcgatgccgtcacc
ctccctctcttcatggctcgaatctctcgacgcaaagctggaaccgacaaattaagatcg
aacagttttgaagtcattgccttagatggagtttgcacgcacgttcttcaattttgcact
gcaggagaaagcacagactggcttcaagcaatatcaaccaacatcaacgatttgatgcag
gagagcataaagacggcgaataaatactgttctcctgatgatcagattgtccacatgggt
tgggtatgcgagcagctccagggcagtgacgccgattcgacacgcggctgcaggtttctg
gcgttgagaggctcttctcttctcatcttcaggagtcctcctgtcatggcgtcagactgg
gctcaagcagaggctagttttcacctctgtgaggttctctttaaggttcataagctatgg
atagccgaagactgctggatacagaccaagttttatatgggcctccagcaggacggtgag
ctgcgggacagtgaacccttctgctttagtgtgcttgtgggtcacggccagagcttctgc
tacagcgttgagctgggctcagaactggtgctgtgggagaaaacatttcagagagcagtg
ttcatggaggtgcagagagtacggtcgaagagctacatgtgcagcagtcaagggaagatc
ctgtgcttcacagtcgactttgagtcgggcttctcctgctccgagagcgtttcaaagaaa
accatctggaaatataaattctcccagctgaagggttcatcggatgacggcaagacacga
gtgaagcttttgttccagaattcagagaataaacagatcgaaatgaaggagctggagttt
gcgaatctgacggccgtccttcactgcatacactcgttcatcgctgccaaagtggccacg
gtggatcccgtcttcgtcaacaatcaaagtctcacgcagaagtacatgtgcagcagctag
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