Ctenopharyngodon idella (grass carp): 127499762
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Entry
127499762 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: liprin-beta-1b
KO
K27096
liprin-beta
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127499762
Membrane trafficking [BR:
cide04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127499762
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
Spc29
DUF16
FlaF
Motif
Other DBs
NCBI-GeneID:
127499762
NCBI-ProteinID:
XP_051726281
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Position
18:25228305..25257615
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AA seq
985 aa
AA seq
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MMSDASDMLAAALEQMDGIIAGSKALDYSNGIFDCQSPTSPFMGSLRALNLLEDLRGVLE
LMDTEERESLRCQIPDSTADSLVEWLHGHLSNGHISITGDVYQDRLNRLESDKESLVLQV
SVLTDQVEAQGEKIRDLDLCLDEHREKLNATEEMLQQELLCRSALETQKLELMAEVSNLK
LKLTAMEKERLDFDDRFGDSEGLILEINELRYRISEMESERLQYEKKLKSTKEELVTLRR
QLDGRDGDLRRLQDETGSRSPTPAGLDSTERVFHTEETLKKRLKEKHMEVQKMKKAMESL
MAANEEKDRKIEELRQSLMRYKKVQEMVMSAQGRKDKVKDGDSDESNSDSSLSMSTALSV
SMDTEKSLLAYTEEVAVRGQNEAATFVSTLQVPSFTVSSPDKADSDPVLEHMQSSSDKEC
QEPTQSQETPLHESPETSDVTKSGSQDNLDEKASEKRPLAVDQRPAESKAFDEFNKITTL
PPKSPSSSRTAEDDSFGTRKMRSSFGRGFFKIKGGKRTASAPNLAETERDGTDHLDLAGM
PQRSADSDSTHTLPISPEGKKKSKGIKALFGKLKRSQSTTFNLDDNLSESEFKRGGVRAT
AGPRLGWSRDLQNTNSELDAPFARWSREQVCDWMQEQGLGLYVSLARQWVSSGQTLLQAS
QQDLERELGIKHPLHRKKLQLALQALGSEEDDNKSKLDYHWVTRWLDDIGLPQYKTQFDE
GRVDGRMLHYMTVDDLLSLKVGSVLHHLSIKRAIQVLRLNNYDPNCLRRRPSDENNISPA
EISQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMALLLNIPPNKTLL
RRHLATHFNLLVGSEAQQLKQDCLENPDYTLLTATAKVKPHKLAFGGFGRKKKQEDNEEY
VCPMDVEMPKGRSFQKGYRGMELQIYDDDLDRFDQMEDSEGTVRQIGAFSEGINNLTSML
KEDEFFKEISTSFPNANMKDDDSNV
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagtgacatgttggcagcagccttggagcaaatggatggtatcata
gcaggctccaaggctctggactactccaatggcatctttgattgtcagtccccaacatcg
cccttcatgggcagcttgcgagccctgaacttactggaggacctgaggggtgttttagag
ctcatggacactgaggagagagagagcttgcgttgtcagatcccagactctaccgcagac
agtctggtggagtggctgcatggtcacctgtcaaatggacacatctcaatcaccggtgac
gtttaccaggacagacttaatcgtcttgaaagtgataaagaatcccttgtgcttcaggtg
agtgttttgactgatcaagtggaggcgcagggagaaaagataagggacctagacctgtgc
cttgatgaacaccgtgagaaactaaatgccaccgaagaaatgttacaacaggaactcttg
tgccgatcagctcttgagactcagaagctggaactgatggcagaggtttccaacttaaaa
ctaaagttaacagccatggagaaagagagactcgattttgatgacagattcggagatagt
gagggtttgattttggagattaatgaactgagatatcgcatttctgagatggagagtgaa
cggttacagtatgaaaagaaattgaaatccactaaggaggagctggttacgttgagaagg
cagcttgatggcagagatggtgatctgaggaggctgcaggatgagacggggtccagatcc
ccaacgcctgcaggcctagacagcacagagagagttttccatactgaggaaacattaaaa
aagaggctcaaagagaaacatatggaagtacagaagatgaagaaagcaatggagtcgttg
atggcggcaaatgaggagaaggaccgcaagattgaagagttgcgacagtcactcatgcgt
tacaagaaagtgcaagaaatggtcatgtcagctcaagggagaaaagataaggtcaaagac
ggagacagtgatgagagcaacagcgacagctccctatccatgtccaccgccctctccgtt
tccatggacacggagaagtctctgctcgcttacacagaggaagttgctgtgaggggtcaa
aatgaggcggctacatttgtcagtacactccaagtgccatcgttcacagtatcatcccca
gacaaagcagacagtgatccagtactggaacacatgcagtcatcaagtgataaagagtgt
caggagccaacacaatcacaggagaccccattacatgagagtcctgaaacatcagatgtc
acaaaatcaggaagccaggacaacctcgatgaaaaagccagtgaaaagaggccattagca
gtagatcagaggccagcagagagcaaagcttttgatgagttcaacaagattacaactcta
ccacccaaatccccaagctcctctcgtactgctgaggatgacagcttcggcaccaggaaa
atgagatcttcctttggacggggattcttcaagatcaagggagggaagaggactgctagt
gcccctaatttggctgagacagagagggacggcactgaccatctggatctggcaggcatg
ccgcagaggtcagctgacagtgacagcacacacactctccccatttcgccggagggcaag
aaaaagtctaaaggaatcaaagcactctttggaaaactcaaaagaagtcaatcaaccaca
ttcaacctggatgataacctatcagagagtgagtttaaacggggtggagtcagagccaca
gctgggcccaggctgggctggtcacgtgacctgcagaacaccaacagtgagctggatgcg
ccatttgcacgctggtcccgggagcaggtgtgtgattggatgcaggagcagggactgggg
ttgtacgtgagtttggcaagacagtgggtctcctctggccagacgctcttgcaggcatcc
cagcaggatctggaaagagagctgggaataaaacatcctctccacagaaagaaactccag
ctggccctgcaggcactgggctcagaggaagatgacaacaagagcaaactagactaccac
tgggtgacaaggtggcttgatgacatcggcctcccacagtacaagactcagtttgacgag
ggccgtgtggatggacggatgcttcactatatgactgtggatgacctgttatctctgaaa
gtaggcagtgttttacatcacctcagtattaaaagagccatccaggtgctccggctcaac
aactatgaccccaactgtctacggcgaagaccttcagatgagaacaacataagtcctgct
gagatctctcaatggaccaaccaccgtgtgatggagtggctgcggtccgttgacctggct
gaatatgcacccaacctgaggggcagtggagtacatggaggactgatggtgctggaacct
cgctttaatgtggagacgatggctctgttactaaatattccccctaataagactctgctg
cggaggcatctggccactcactttaacctgctggtaggttctgaggcccagcaactcaaa
caggattgtctagagaacccagactacaccttactcactgccacagctaaagtcaagcca
cacaagctggcatttggaggttttggtaggaagaagaagcaagaggacaatgaagagtat
gtttgtcccatggatgtggagatgcctaaaggacgcagcttccagaaaggctacagaggc
atggagctccagatctatgatgatgacctagatcgattcgaccagatggaggactctgag
gggacagtaaggcagattggcgctttctctgagggcatcaacaacttaacgagtatgctg
aaagaggatgagttcttcaaggagatatccacgtcatttcccaatgccaacatgaaggat
gatgactccaacgtgtga
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