Ctenopharyngodon idella (grass carp): 127501402
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Entry
127501402 CDS
T08802
Name
(RefSeq) pogo transposable element with ZNF domain isoform X1
KO
K22594
pogo transposable element with ZNF domain
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127501402
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
127501402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_1
zf-Di19
Motif
Other DBs
NCBI-GeneID:
127501402
NCBI-ProteinID:
XP_051729323
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All DBs
Position
19:29657998..29670778
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AA seq
1318 aa
AA seq
DB search
MRNMAESDLYMQCDEDDLEPCQSITENRNQRYNKVTVVPSGNSAPIPAQSDGTTEPTSAT
TDLVNQAVPLASAPAVTLLPNAVQPGGAAGGTLGQTIYISAQPNPGQPLAGPMSLGTSLG
YILNGQPISFLTAAQTPQVIAPRMVTPGSALQQTTPGKLSALQIPVTLTINSPSNVQSIT
SSAPGVTTLNVTPSNVLPAAAPGATIKVIKFTKLAGAPAATGQVVSSLVQPTTTVTIQNN
INRAPAPLLSGGLSQTVRPQAQIFAPPATTTNVLKRGSSSSNFCIRCKAVYQKSQSLRGY
FCQCNQELIKSVRDLKAQARKRIKRSSDKTHSKPSTSENPVSFSTSSETSLKHVTTSEIP
EGAPNPRSGDFDDQGRMIMLVEDFFYGQHPGQPASLRTNAEPVAMKCQFCDKKVKGNIKM
MNHMKHHMELERQTGEVDYHTMCQYCYRNFSTPFRLQCHVETVHNHAESSKVCKICEWSF
ESEPLFLNHMKHAHKPGEMPYMCQVCEYRSSFYQDVISHFTEQHKDTCILMCPYCLKVFR
SCGGFQLHYIRHQKKKAHHCGRCRLQFTYEKDELHHRQRFHRTCVKPKQLEGLTPGTRVI
IRAYADSTDNRVQLGTPPLNTCSNATSTPAASHSVTNKVIPLKKKPVESMMELMVKFESQ
CKPTEKHFCMECNFDIPYFSNHFPTYVSCSLCRYCTCCSRAYANHMISVHVPRKSTKKYI
TLYKPCPKKGRLNCTTCRYKTRVGDSMAKHLADYPKHQASRCTLREGFSRGYKRFVFIPT
DLLRGGQILNNAFFLPLQVKQVNRSSLPLSSKPLPRPSYTITLPASPAHTASFPIQVQSI
EQTAVPDKNCGVKPDAPKQTLNGGLSEVDTGRTVENSLTVAQLKVVLYALCCGIPQAANH
FDTPPEEVQSLLLKRKLQLEPLRSREGLTPQAADRLVEWVLCQREQQLPIDEANLFDFMS
SHGAQGISYDSAVDFLLRHDLGLQAFATSSKLLPGKSQELERSFSSFLKKQVNSQAFRLS
SMGAMDELSIFVDMEQLDEASADSSSMLSAFKLMGTTHPFIEVVFTALADGTTLSTMLFL
RGEPLKPDAHSLPDLIILEARPEGFTDEEKLQLWLDKVWCRHVNPISGGKGLLIMDTYKG
HTSNEFLAALNSANTLPGLIPRSCSRRLQPLEACVGPVLREFLQARWSEHVTTAPQELAG
AKPADLALLLSRWLVEVLDVLKAEPKLLFRSFDRVLSSNPEVTSEEPSELVRSLTEALLV
NKLQGDKVEEQKAETSSIVSAESLSSPQSSMLSLKKIFEKDSDLESFHGFEDSEIIDH
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacatggcagaatcggacctttacatgcaatgtgatgaagatgatctagagcca
tgccagagtattacagaaaacaggaatcagcgatataacaaagttactgtagtcccaagt
ggcaatagtgcaccgataccagcacaatctgatggcaccactgaaccgacatcagctact
actgacctcgtaaatcaagctgtgcctttggcttctgctcctgctgttacgttactgcct
aatgctgtccagccaggtggagcagcaggtggcacacttggccaaactatctacatcagt
gcacagcctaatccaggtcagcctctggcaggcccaatgagtttgggaacatcacttggt
tacatcttgaatggacagcctattagttttctgactgctgctcagacaccccaggtgatt
gctccgcggatggtcaccccagggagtgcattacagcaaacgacgcctggaaaactatca
gcattgcagatcccagtcaccttgaccatcaatagcccctcaaacgtacaaagcatcacc
tcatcagccccaggagtgaccactctcaatgtgacaccctccaacgtcctaccagccgca
gctccaggtgcaacaattaaagttataaagtttacgaagcttgctggagcacctgcagct
actggtcaagtagtgagttcactagtgcagcccaccacaaccgtcaccatccaaaacaac
ataaacagagctccagccccgctcctgtctggtgggctgtctcagactgtgagacctcaa
gcgcagatctttgcccctcctgccacaacaactaacgtgttaaaaagaggctccagttct
tcgaatttctgtatccgctgtaaagccgtttaccaaaagagtcagtccctccgtggatac
ttctgtcaatgcaatcaagaacttatcaagagcgtccgggacctgaaggcccaagctaga
aaaaggatcaagcgctcgagtgacaaaacccactcaaaaccctccacatcagagaatccc
gtttccttctccacatcctcagaaacatctctcaaacacgtcaccacttctgagataccc
gagggagcgcctaatcctcgctctggagattttgacgaccaaggcagaatgatcatgtta
gttgaagacttcttctatgggcaacatcctggccaacctgcatcactaagaaccaatgca
gagcccgtcgcaatgaaatgccaattttgtgacaagaaggtgaagggcaacatcaagatg
atgaaccacatgaaacaccacatggagttggagcgccaaacaggggaagtggactatcat
actatgtgccagtattgctacagaaacttctcaacgcccttccgtctgcagtgccacgtt
gagacagttcataaccatgcagagtcctcaaaagtgtgcaagatctgtgagtggtcattt
gagagcgaacccctctttctgaaccacatgaaacacgcgcacaagcctggtgagatgccc
tacatgtgtcaggtgtgcgagtaccgatcttctttctaccaagatgttataagccacttc
acagagcagcacaaggacacctgcatcttaatgtgtccctactgcttaaaagtgtttagg
tcttgtggcggcttccagttgcactacattagacatcagaaaaaaaaagcgcatcattgt
ggcagatgccgacttcagttcacttatgagaaggacgagttgcaccacagacaaaggttt
cacaggacctgtgtcaaacccaagcaattagagggcctcacacctggtactagggtaatc
atccgagcttacgctgacagtactgacaacagagttcagttaggaacacctccattgaac
acttgttcaaatgctacatcaacacctgcagcatctcacagtgtcaccaataaagtcatt
cctctcaagaaaaagccagtggaaagcatgatggagctaatggtcaagtttgagagtcaa
tgcaagccaacagaaaaacacttctgcatggaatgcaactttgacattccgtatttttcc
aaccatttccccacctacgtgagctgttccctctgccgatactgtacttgctgttccaga
gcttatgcgaatcacatgatcagtgtacatgttcctcggaaaagcaccaaaaaatatatc
accctatacaaaccctgcccaaaaaaggggaggctgaactgtaccacatgtagatataaa
actcgggttggagattcgatggccaaacatcttgctgattatcctaaacatcaagcaagc
cggtgcaccttgcgggaaggattttcacgtggctataaaagattcgtcttcatcccaacg
gacctactccgaggaggtcagatactcaacaacgcattctttttgcctttgcaagtgaag
caagtgaacaggagttcacttcctctgtcctctaaaccccttcctcgacccagctacaca
ataacgctgcctgctagtcccgctcacacagcgtcctttcccattcaggtgcaatctatt
gaacaaactgccgttccagacaaaaactgtggcgtcaaaccagacgccccgaagcaaact
ttgaatggagggctttctgaagtcgatacaggacgtacagtggagaattcacttaccgta
gctcagctgaaagttgtactgtacgccctctgctgtgggatcccacaggccgccaatcac
ttcgacacgcctccggaagaagtccagtcgttgcttttgaaacggaagcttcagcttgag
cccttgagaagcagggaaggcttgacgccacaggccgccgataggttagtcgaatgggtg
ctatgccagcgtgagcaacagctacctatcgatgaagctaaccttttcgacttcatgagc
agtcatggtgcgcaaggtatctcttacgactcggcggttgatttcttgctacgccatgat
ctgggcttgcaggcatttgccacctctagcaagttgctaccgggtaaatcccaggagctg
gagcgctccttcagcagcttcctgaaaaagcaagtcaattcacaagcctttagactatct
tctatgggcgccatggatgagctttccatatttgtagatatggagcagctggatgaagcc
tctgcggattcgtcgtccatgttgtctgcttttaagttgatgggcaccacacatccattc
atagaggttgtgttcacagccctggctgatgggaccacattatccaccatgcttttcctc
agaggcgaacctctcaagccagatgcacattccttgccagacctcatcatcctggaggct
agaccagaagggttcacggatgaagaaaaactacagctttggttggacaaggtgtggtgt
cggcatgtcaaccctatttctggtggcaaagggttgctgataatggacacgtacaaaggc
cacacgtctaatgaattcttggcggcgctcaacagtgccaacactcttccaggtctgatc
cctcgcagttgctctcgccgtctgcagccccttgaagcctgcgtggggcctgtgttacgc
gagtttctacaagctcgatggagcgagcatgtgacgacggcgccacaggaactggctgga
gccaaaccagctgaccttgcacttcttctctctcgctggcttgtggaggtactggatgtc
cttaaagcagagcctaagctactcttccgctctttcgatcgggttttgagctcaaaccca
gaggtgacgtctgaggaaccttcagagctcgtgcggagtctcactgaagctctccttgtt
aataaattgcaaggagataaagttgaggagcagaaagcggagacctcgagtattgtttct
gcagaatctttgtcctctccgcagtccagcatgctttcgttgaaaaagatctttgagaaa
gacagcgatttggagtctttccatggttttgaagactcagaaatcattgatcattaa
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