Ctenopharyngodon idella (grass carp): 127505158
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Entry
127505158 CDS
T08802
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 1 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127505158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127505158
03036 Chromosome and associated proteins [BR:
cide03036
]
127505158
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
127505158
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
127505158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
127505158
NCBI-ProteinID:
XP_051736459
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All DBs
Position
22:30240702..30276649
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AA seq
837 aa
AA seq
DB search
MMRACADHIPPEQDQHCGTEQSLAMSAKADLDVLPHDADVPSESSVSHASNDSSSHRLKP
QDTTTIIFPASAHSLPKVELPQNAIKAIKGSELEAASLPAQVGGTIVHVLGWKEGMAILP
GSNLKLCVSDTGSLEVVSEGKIGSANLTTGGAQTKSADMELKQGEKSGISAGGNGRPAAF
VEADRLQRGHMEAQENPVHSKCSETSTKQTYLHGEPMSKNPAGIAEAQDAYHEHEMLKPM
KKRKRREYNSPSEEESDAGPMEEKVEALKIDGRHNKAETKLELWSWPQYLEQQKAVAAPA
RLFQETQRVPMIKNNFRQGMKLEGIDPQHPSMYFVLTVAEVCGFRLRLHFDGYSDCHDFW
VNANCPDIHPAGWCESTGHKLYTPKGCKEEEFSWSNYLKITRSQAAPKELFSSSIKSETD
CGFEVGMKLEAVDRMNPSLICVATVTDKVGNRFLVHFDNWDDTYDYWCDASSPYIHPTGW
CQERGLPLTPPQDYPDPDRFSWERYLEETGSTAVAAEAFRVRPSHSFQVQMKLEAVDKRC
PGLIRVATVQEVDIYRIKIHFDGWSHLYDEWMDSDHPDIHPAGWCEITGHPLKPPPCQPT
AQKPGPRENLTARQPNFSMSCKSLPQPRNTSKYSFHHRKCPTPGCDGSGHVTGRFTAHHC
LSGCPLAERNQGRLKADLSDTEGSRRNLLVFGQRAKKSRYHGRIGRPPKYRKSQQRNCQN
MTVEGMYPSLFMTAFTANSDRTLSLCWEQHCKLLPGVAGIHASQVATWTIEEVFGFVNNL
IGCEEQARIFKDEMIDGEAFLLLTQNDIVKIMNIKLGPALKIHNAILMFKSTDEGLK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcgcatgcgcagatcatattcctcccgagcaagaccagcactgtggtactgag
cagagtcttgctatgagtgccaaagcagacctggatgtcctgccacatgatgcagatgtc
ccatctgaaagcagcgtctctcacgcttccaatgacagttcctctcatcggctgaaaccc
caggatactaccacaataatttttccagcttctgctcactcattgccaaaagtggagctg
cctcaaaatgcaatcaaggcgattaaaggcagtgaactggaggctgcatcacttcctgct
caggttggagggaccattgtccatgttctgggctggaaggagggaatggcgatcctccct
ggaagcaatctgaagctatgtgttagtgatactggttcgctggaagtggtcagtgaaggg
aaaataggctctgctaacctgaccaccggaggagctcagacaaaatcagctgatatggag
ctcaaacagggtgaaaaatcaggcatctcggcaggtgggaatggcaggccggctgccttt
gtggaggctgacagacttcagagaggacatatggaagctcaagaaaatccagttcatagc
aagtgcagtgagacatcgaccaaacagacttacctacatggagaaccaatgtctaaaaat
cctgcagggattgcagaagcacaggatgcctatcatgagcatgaaatgctgaagcccatg
aagaagaggaagaggagggaatacaacagcccatcagaagaggagtctgatgctggacca
atggaggaaaaagttgaggctttaaaaattgatggcagacacaacaaagcagagactaaa
ctggagttgtggtcctggccacagtacctagagcaacagaaagctgtggctgctccagct
agactcttccaggagacccaaagggtacccatgattaagaacaacttccgacagggtatg
aagttagaaggcattgatccccagcatccctctatgtatttcgtcctgacggtggctgag
gtgtgtggcttcagattacgccttcattttgatggctattctgactgccatgacttctgg
gtcaatgctaactgccctgatattcacccagctggatggtgtgagagcacaggacacaag
ctatacactccaaaaggatgtaaagaagaagagttttcttggtccaactacctaaaaatc
accagatcacaagcggcaccgaaagagttgttttctagctcaatcaaatctgagacagac
tgtgggtttgaggtggggatgaagttggaggctgtcgaccgcatgaatccctctctcatc
tgtgttgccacagtaacagacaaagtgggcaaccgttttctggttcattttgataactgg
gatgacacgtatgactactggtgtgatgccagcagcccatacattcatcccactggctgg
tgtcaagagaggggcctccccctgacgcctccgcaggattatcctgaccccgacaggttc
tcatgggagagatatttggaagagacgggctcaacggcagtcgctgctgaagcattcaga
gtgcgtccttcccatagcttccaggtgcagatgaagttggaggccgtggataagaggtgt
ccggggctgatccgtgtggctacggtgcaggaggtggacatttacagaataaagattcat
tttgatggttggagccacttgtatgatgagtggatggattcagaccatccagacatccac
cctgcaggctggtgtgaaatcacaggacacccgctcaaacctccaccctgccaacccact
gcccagaaacctggtcccagggagaacctgacagcccgacagcccaacttctccatgtct
tgtaaaagtctgcctcagccacgcaacacctccaaatacagctttcaccacagaaagtgc
cctactccgggatgtgacgggtcaggtcacgtgaccgggcgttttacagcacatcactgt
ttatctggctgtccgctggctgagaggaaccagggccggctcaaggcggatctctctgat
acagaaggatccagacgtaacctgctggtcttcggccagagagcaaaaaagtcacgatat
catggcaggattggtcgcccccctaaatatcgtaaaagtcagcaaagaaattgtcagaat
atgactgtggaaggaatgtacccttctctcttcatgacagcgtttactgcaaactctgat
cgaaccctctctctctgctgggagcagcactgcaaactactgcctggtgttgcaggaatt
catgcaagtcaagtagctacctggactatagaggaggtgtttggatttgttaataacctt
attggttgtgaggagcaggcccgaatttttaaagatgaaatgatcgatggagaggccttc
ctccttctgactcaaaatgatattgtgaagatcatgaatataaagctaggaccagcgctg
aagattcacaacgccattttaatgttcaaaagcacagatgaaggcctgaagtga
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