Ctenopharyngodon idella (grass carp): 127508294
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Entry
127508294 CDS
T08802
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127508294
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127508294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
CC149
zf-RING_10
PHP
GlutR_dimer
DUF4201
Motif
Other DBs
NCBI-GeneID:
127508294
NCBI-ProteinID:
XP_051742023
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Position
3:complement(41483727..41490884)
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AA seq
542 aa
AA seq
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MAEARFSQDEFTCPVCLDLLKDPVTIPCGHSYCKSCITGCWDQEDEKRVYSCPQCRQTFS
PRPALAKNTILAEVVEKLKKTKLPADCYAGAGDVQCDVCTGRKYKAVKSCLVCQESFCQT
HFDRHEEYHSRKPHKVIDATGRLQDMICRKHDKELEMFCITDQQCICVWCKEYEHKNHNT
VSTAAQRTEKQKQLKETQMKIRQRIQQRQKDLQQLREAVESHKRSAQTAVEDSERIFTEL
ICSIERSRSEVTQLIRDQEKAAVSRAEGRLERLEQEINDLRRRDAELEQLSHTHDHIHFL
QSFQSLSAPPESTDEPDDPFRSLFSFDGVRESVRQLRDKLEDFCKEEIKKISDRVTFTNM
NPRTRNDFLQYSHQLTLDLNTVYKHLRLSERNRVITYTNTVQPYPDHPGRFDQRCQVLCR
ESVCGRCYWEIEWSGSVFISVSYKSISRKGRGYECLFGYNDQSWSLYCSSSSYSFIHNNI
VTVLPVKSISSRIGVYVDHSAGTLSFYSVSDTMSLIHTVQTTFTQPLYPGFYVNTGSSVK
LC
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccagattttctcaggatgagttcacgtgtccagtgtgtctggatctcctg
aaggatccagtgaccattccctgtggacacagttactgtaagagctgtattacaggctgc
tgggatcaggaggatgagaagagagtctacagctgccctcagtgcagacagaccttcagt
ccaagacctgctttagctaaaaacaccattctggctgaagtggtggagaaactgaagaag
actaaacttcctgctgactgttacgctggagctggagacgtgcagtgtgatgtctgtact
ggaagaaaatacaaagctgtcaagtcctgtctggtgtgtcaggagtctttctgtcaaact
cattttgaccgtcatgaggaatatcactctcgtaaaccacacaaagtgatcgatgccacc
ggacgactgcaggacatgatctgtcgtaaacatgataaagagctagaaatgttctgtatc
actgatcaacaatgcatctgtgtgtggtgtaaggagtatgaacataaaaaccacaacact
gtatcaactgcagcacagaggacagagaaacagaaacagctgaaggagacgcagatgaag
atccgtcagagaatccagcagagacagaaagatcttcagcagctgagagaggctgtggag
tctcataagcgctctgcacagacagcagtggaggacagtgagaggatcttcactgagctc
atctgctccattgagagaagccgctctgaggtcacacagctgatcagagatcaggaaaag
gctgcagtgagtcgagctgaaggacgactggagcgactggagcaggagatcaatgatctg
aggaggagagacgctgagctggagcagctttcacacacacatgatcacatccatttcctg
cagagtttccagtctctctcagcacctcctgaatctacagacgaacccgacgatcccttc
agatctcttttctcttttgatggcgtgagagaatctgtccgtcagctgagagacaaactg
gaggatttctgcaaagaggagatcaagaagatctctgacagagtcacattcaccaacatg
aatcccaggaccaggaatgacttcctccagtattcccatcagctcactctggatctgaac
acagtgtataaacatctccgtctgtctgagaggaacagagtgattacttacactaacaca
gtccagccgtatcctgatcatccaggcagatttgatcagaggtgtcaggtgttgtgtaga
gagagtgtgtgtggacgctgttactgggagattgagtggagtgggagtgtgtttatatca
gtgtcatataagagcatcagcaggaagggacggggttatgagtgtttgtttggatataat
gatcagtcctggagtttgtactgctcttcctccagttactcattcatacacaataacata
gtgactgttctccctgtaaagtccatcagcagtagaataggagtgtatgtggatcacagt
gcaggaactctgtccttctacagcgtctctgacacaatgagcctcatccacacagtccag
accacattcactcagccgctctatcctgggttttatgttaatactggatcatcagtgaaa
ctgtgttga
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integrated database retrieval system
