Ctenopharyngodon idella (grass carp): 127508819
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Entry
127508819 CDS
T08802
Name
(RefSeq) nuclear factor 7, ovary-like
KO
K12012
tripartite motif-containing protein 35
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127508819
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127508819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-RING_5
U-box
zf-Nse
Apolipoprotein
Prok-RING_4
zf-RING_6
Sina_RING
DUF1664
zf-RING_10
Mitofilin
CdaS_N
zf-ANAPC11
Tweety
Motif
Other DBs
NCBI-GeneID:
127508819
NCBI-ProteinID:
XP_051743156
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All DBs
Position
3:complement(52482913..52492882)
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AA seq
453 aa
AA seq
DB search
MASLSAEELSCPVCYEIFKTPVVLLCSHSFCKECLQQFWRIKKTQECPVCRRRSSNEHPP
VNLVLKNLCESFLKEKNERRSSGSEEICSLHSEKLKLFCLEDKQPVCVVCRDSQKHISHT
FRPINEVASSYKEELNTALKSIRGKLKHKENIKGEFEKTVQHIRSQAEHTELQIKQQFEK
LHQFLRDEEEATITALREEEEQKKRMMKEKLEEMKRHISALSHTIRDMEEMMKANDVCFL
KEFTVSMERVQSSQPDPQMASGALIHVPRYLGNLPFRVWKKMQDIVQNTPVILDPNTAHP
DLVMSDDLTSVRHSGNKQPFPDNPERFDWYHCILGSEGFTSGTHCWDVEVNGSSPWGLGV
TTASNQRKGYDFFDTDIWSVEYELPLGSGFPVEQDLDCVRVNLDYDRGTVSFSDPVTNTH
LHTFTTNFTDKLFPFFWCYDRFTSFRILPDKLM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcatcactatctgcagaagaactttcttgtcctgtgtgttatgaaatcttcaagact
cctgtcgttttgttgtgtagtcacagtttctgtaaagagtgtcttcaacagttctggaga
atcaagaaaactcaggagtgccctgtctgcaggagaagatcctcaaatgaacatcctcca
gttaatcttgtgttaaaaaacttgtgtgagtcgttcctgaaggaaaaaaatgagaggcgt
tcatcagggtctgaggagatctgcagtttacacagtgagaaactcaaactcttctgtctg
gaggacaaacagcctgtgtgtgtagtgtgcagagattcacagaaacacatcagtcacaca
ttcagacccatcaatgaagtggcttcatcatataaggaggagctcaatacagcactgaag
tccatacgtggaaaacttaaacacaaagaaaacattaagggagagtttgagaaaactgtt
caacacatcaggtctcaagctgagcacacagagcttcagattaaacagcagtttgagaag
cttcaccagtttctcagagatgaagaagaagctacaatcactgcactgagggaggaagag
gagcagaagaagcggatgatgaaggagaagctggaggagatgaaaagacacatctcagct
ctttcacacacaatcagagacatggaggagatgatgaaagccaatgacgtctgctttctg
aaggagtttacagtctcaatggaaagagtccagagctcacaaccggatccacagatggct
tctggagctttgattcatgtgccacgttatttgggcaacctgccgttcagagtctggaag
aaaatgcaggacatcgtccaaaacactcctgtgattctggatccaaacacggctcatcca
gatctcgtcatgtctgatgatctgaccagtgtgagacacagcgggaacaaacaacctttt
cctgataatccagagagatttgactggtatcactgtattctgggttcagagggttttacc
tcaggaacacactgctgggatgtggaggttaatggcagttcaccctggggtcttggagta
actacagcatcaaaccagaggaagggatatgatttctttgacactgatatctggagtgtg
gagtacgagctgcctttaggttctggttttcctgttgaacaggatcttgattgtgtgaga
gtgaatctggactatgacagaggaacggtgtcattttctgatcctgtaactaacacacat
ctacacacattcacaaccaacttcactgacaaactctttccattcttctggtgttatgac
agatttacctctttcaggattttaccagataaactgatgtaa
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