Ctenopharyngodon idella (grass carp): 127509344
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Entry
127509344 CDS
T08802
Name
(RefSeq) RNA binding protein fox-1 homolog 3 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127509344
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127509344
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
127509344
NCBI-ProteinID:
XP_051743930
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All DBs
Position
3:complement(4167442..4495108)
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AA seq
409 aa
AA seq
DB search
MDIPLWTGGVCKSAGVALVYGTVLTDHLWRLGLPLFSTRGNQEATNPADAMAQTYTPQYA
HPAQNGIPAEFSATHALPTQDYAGQNRVPDHGLTLYTPAQTHSDLANADSSTPAISTGTN
TATTEDVTQTEVSQQVPHSDSTEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEII
FNERGSKGFGFVTFETSADADRAREKLNGTIVEGRKIEVNNATARVMTNKKVVNPYTNSW
KLNPVVGAVYGPELYAVAGFPYPAAGATVAYRGAHLRGRGRAVYNTFRTAPPPPPIPAYG
AVVYQDGFYGAEIYGGYAAYRYTQPATATAYSDSYGRVYATTDPYHHTIGPAATYSVGTM
EGNLRELEFRRCRGHQLDSDWCSVIFDVAGEPVQRRLQPLHALLERLNH
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggatattcccctctggacaggtggtgtgtgtaagtcggctggtgtcgctctggtgtac
gggacggtcctgaccgatcacctgtggcgattaggacttcctctcttcagcacacggggt
aatcaggaggccaccaatccggcggacgcgatggcccagacgtacaccccgcagtacgcg
catcccgcgcagaacggcatccctgcagagttcagtgcgacacacgctcttcccacgcaa
gactacgcaggacagaaccgagtcccggatcacggcttgacgctctacacgccggcacag
actcacagcgatctggccaacgccgacagcagcacgccagctatcagcactggaaccaac
acagcaacgacggaagatgtgacgcaaacagaagtttcccagcaggtgccacattcagac
tctacggaaaaacagcagcccaagaggttacacgtctccaacatccccttccgcttccgg
gacccagatttacggcaaatgtttgggcaatttgggaagatcttagacgtggagattatc
tttaatgaaagaggatcaaagggctttggctttgtaacttttgaaacgagcgcagacgca
gatcgcgcgcgggagaaactaaacggtacaatcgtagaaggacgtaaaatcgaggtgaac
aacgccacggcgagagtgatgacgaataagaaagtagtaaacccgtacacaaacagctgg
aagctcaatccggttgtaggagccgtttacggaccggagctctacgcagtggcgggtttc
ccgtatcccgcggcaggagcgacggtggcgtacagaggggctcatctgaggggcagaggc
cgtgccgtttacaacaccttccgtacggctcctcctcctccacccatcccggcgtacgga
gcggtggtgtatcaggacggattctacggagccgagatctacggcggatacgcggcgtac
agatatactcagcctgcgacggctacagcgtacagtgacagttatgggagagtctatgca
actactgacccatatcaccacaccatcggcccggcggccacatacagcgtggggaccatg
gaaggaaatttgagggagctggagttccgtcgttgccgtggccaccagcttgactctgat
tggtgctctgtcatctttgatgttgcaggcgagcctgtacagaggaggctacagccgctt
cacgccctactagagagactaaaccactga
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