Ctenopharyngodon idella (grass carp): 127509380
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Entry
127509380 CDS
T08802
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127509380
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127509380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
PHP
Phage_int_SAM_5
CCDC47
Prok-RING_4
eIF3_subunit
DUF5446
DUF4239
Motif
Other DBs
NCBI-GeneID:
127509380
NCBI-ProteinID:
XP_051743994
LinkDB
All DBs
Position
3:complement(42836446..42899488)
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AA seq
545 aa
AA seq
DB search
MAEARISVDQNAFICPLCLDLLKDPVAIPCGHSYCKSCITGCWDQEDEKRVYSCPQCRQT
FSPRPALGKNTILAEMVEKLKKTKLPADCYAGAGDVQCDVCTGRKYKAVKSCLVCQESYC
QTHFDRHEKYHSHKPHKVIDATGRLQDMICHKHDKELEMFCITDQQCICVWCKEYEHKDH
NTVSTAAQRTEKQKQLKETQMKIRQRIQQRQKDLQQLREAVESHKRSAQTAVEDSERIFT
ELLRSIERSRSEVTQRIRDQEKAAVSRAEGRLERLEQEINDLRRRDAELEQLSQTHDHIH
FLQSFQSLSAPPESTDEPDDPFSSLFSFDGIRESIRQLREKLEDFCKEEIIKISDRVTFT
NMNPKTKNDFLQYSHQLTLDLNTVNKHLRLSERNRVITVTDTVQPYPDHPDRFDQRWQVL
CRESVWGRCYWEIEWSGNYVGISVSYKSIRRKGGGNECAFGHNDQSWSLFCSSSRYSFIH
NQIRTDLPAASISSRIGVYVDHSAGTLSFYSVSDTINLIHTVQTTFTQTLYPGFWVGSES
LVKLC
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcaagaatttcagtggatcagaatgcgttcatttgtccactgtgtctggat
ctgctgaaggatccagtggccattccctgtggacacagttactgtaagagctgtattaca
ggctgctgggatcaggaggatgagaagagagtctacagctgccctcagtgcagacagacc
ttcagtccaagacctgctttaggtaaaaacaccattctggctgaaatggtggagaaactg
aagaagactaaacttcctgctgactgttacgctggagctggagacgtgcagtgtgatgtc
tgtactggaagaaaatacaaagccgtcaagtcctgtctggtgtgtcaggaatcttactgt
caaactcattttgaccgtcatgagaaatatcactctcataaaccacacaaagtgattgat
gccactggacgactgcaggacatgatctgccataaacatgataaagagctagaaatgttc
tgtatcactgatcaacaatgcatctgtgtgtggtgtaaggagtatgaacataaagaccac
aacactgtatcaactgcagcacagaggacagagaaacagaaacagctgaaggagacgcag
atgaagatccgtcagagaatccagcagagacagaaagatcttcagcagctgagagaggct
gtggagtctcataagcgctctgcacagacagcagtggaggacagtgagaggatctttact
gagctcctccgctccattgagagaagccgctctgaggtcacacagcggatcagagatcag
gaaaaggctgcagtgagtcgagctgaaggacgactggagcgactggagcaggagatcaat
gatctgaggaggagagacgctgagctggagcagctttcacaaacacacgatcacatccat
ttcctgcagagtttccagtctctctcagcacctcctgaatctacagatgaacctgacgat
cccttcagttctctcttctcttttgatggcataagagagtctatccgtcagctgagagaa
aaactggaggatttctgtaaagaggagatcataaagatctctgacagagtcactttcacc
aacatgaatcccaagaccaagaacgacttcctacagtattcccatcagctcactctggat
ctgaacacagtgaataaacacctccgtctgtctgagaggaacagagtgattactgtcact
gacacagtccagccgtatcctgatcatccagacagatttgatcagaggtggcaggtgttg
tgtagagagagtgtgtggggacgctgttactgggagattgagtggagtgggaattatgtg
ggtatatcagtgtcatataagagcatcaggaggaagggagggggtaatgaatgtgcgttt
ggacataatgatcagtcctggagtttgttctgctcttcctccagatactcattcatacac
aatcagatacgtactgatctccctgcagcgtccatcagcagtagaataggagtgtatgtg
gatcacagtgcaggaactctgtccttctacagcgtctctgacacaataaacctcatccac
acagtccagaccacattcactcagacgctctatcctgggttttgggttggttcagaatca
ttagtgaaactgtgttga
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integrated database retrieval system
