Ctenopharyngodon idella (grass carp): 127509755
Help
Entry
127509755 CDS
T08802
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127509755
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127509755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
PHP
CC149
DUF2400
eIF3_subunit
Motif
Other DBs
NCBI-GeneID:
127509755
NCBI-ProteinID:
XP_051744664
LinkDB
All DBs
Position
3:complement(40159154..40165009)
Genome browser
AA seq
544 aa
AA seq
DB search
MAEARISVDQNAFTCPVCLDLLKDPVTIPCGHSYCKICITGCWDQEDEKRVYSCPQCRQT
FSPRPALAKNTMLAEVVEKLKKTTLPADCYTGAGDVQCDVCTGRKYKAVKSCLVCQESFC
QTHFDRHEEYHSRKPHKVIDATERLQDMICRKHDKELEMFCITDQQCICVWCKESEHKDH
NTVSTAAQRTEKQKQLKETQIKIRQRIQQRQKDLQQLREAVESHKRSAQTAVEDSERIFT
ELICSIERSRSEVTQLIRDQEKAAVSRAEGRLERLEQEINDLRRRDAELEQLSHTHDHIH
FLQSFQSLSAPPESTDGPDDPFSSLSSFDGVRESVRQLRDKLEDFCKEEIKKISDRVTFT
NMNPKTRNDFLQYSHQLTLDLNTVNEYLRLSERNRVITVTDTVQPYPDHPDRFDQRCQVL
CRESVCGRCYWEIEWSGSVCISVSYKSISRKGWGDECVFGANDQSWSLFCSSSIYSFWHN
DKRTALPVKSISSRIGVYVDHSAGTLSFYSVSDTMSLIHTVQTTFTQTLYPGFAARSGSS
VKLC
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagccaggatttcagtggatcagaatgcgttcacatgtccagtgtgtctggat
ctcctgaaggatccagtgaccattccctgcggacacagttactgtaagatctgtattaca
ggctgctgggatcaggaggatgagaagagagtctacagctgtcctcagtgcagacagacc
ttcagtccaagacctgctttagctaaaaacaccatgctggctgaagtggtggagaaactg
aagaagactacacttcctgctgactgttacactggagctggagacgtgcagtgtgacgtc
tgtactggaagaaaatacaaagccgtcaagtcctgtctggtgtgtcaggagtctttctgt
caaactcattttgaccgtcatgaggaatatcactctcgtaaaccacacaaagtgatcgat
gccactgaacgactgcaggacatgatctgccgtaaacatgacaaagagctagaaatgttc
tgtatcactgatcaacaatgcatctgtgtgtggtgtaaggagtctgaacataaagaccac
aacactgtatcaactgcagcacagaggacagagaaacagaaacagctgaaggagacgcag
ataaagatccgtcagagaatccagcagagacagaaagatcttcagcagctgagagaggct
gtggagtctcataagcgctctgcacagacagcagtggaggacagtgagaggatcttcact
gagctcatctgctccattgagagaagccgctctgaggtcacacagctgatcagagatcag
gaaaaggctgcagtgagtcgagctgaaggacgactggagcgactggagcaggagatcaat
gatctgaggaggagagacgctgagctggagcagctttcacacacacatgatcacatccat
ttcctgcagagtttccagtctctctcagcacctcctgaatctacagatggacccgatgat
cccttcagttctctctcctcttttgatggcgtgagagaatctgtccgtcagctgagagac
aaactggaggatttctgcaaagaggagatcaagaagatctctgacagagtcacattcacc
aacatgaatcccaagaccaggaacgacttcctacaatattcccatcagctcactctggat
ctgaacacagtgaatgaatacctccgtctgtctgagaggaacagagtgattactgtcact
gacacagtccagccgtatcctgatcatccagacagatttgatcagaggtgtcaggtgttg
tgtagagagagtgtgtgtggacgctgttactgggagattgagtggagtgggagtgtgtgt
atatcagtgtcatataagagcatcagcaggaagggatggggtgatgagtgtgtgtttgga
gctaatgatcagtcctggagtttgttctgctcttcctccatttactcattctggcacaat
gacaaacgcactgctctccctgtaaagtccatcagctctagaataggagtgtatgtggat
cacagtgcaggaactctgtccttctacagcgtctctgacacaatgagcctcatccacaca
gtccagaccacattcactcagacgctctatcctgggtttgctgctcgttctggatcatca
gtgaaactgtgttga
DBGET
integrated database retrieval system
