KEGG   Ctenopharyngodon idella (grass carp): 127509951
Entry
127509951         CDS       T08802                                 
Name
(RefSeq) zinc-binding protein A33-like
  KO
K12012  tripartite motif-containing protein 35
Organism
cide  Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:cide00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cide04121]
    127509951
Ubiquitin system [BR:cide04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    127509951
SSDB
Motif
Pfam: PRY SPRY zf-B_box U-box zf-RING_UBOX zf-C3HC4 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_5 zf-RING_2 zf-Nse zf-RING_10 Gp-FAR-1 DUF4200 Prok-RING_4 ECH_2 Apolipoprotein EutA zf-RING_6 PIN_8
Other DBs
NCBI-GeneID: 127509951
NCBI-ProteinID: XP_051745320
LinkDB
Position
3:complement(12110507..12115724)
AA seq 451 aa
MYSLSEEELSCPMCCEIFKNPVILSCSHSVCKECLQQFWRTKGTHECPVCKRISSHAEPP
CNLALKNVCESFLKERNERRSSEEICSLHSEKLKLFCLEDKQPACVVCFTSQQHDNHKFR
PISEVASSYKEEINTLLKSLQEKLIHKEKVKGVFEKTVHHIKSQAEHTERQIKQQFDKLH
QFLRDEEEATITALREEEEQKKQMMKEKLEEMNRHISALSHTIKDMEEMMKDNDVCFLKK
FPVSMERVKSSQPDPQMASGALINVPRYLGNLPFRVWKKMQDIVQNTPLILDPNTAHPDL
VLSDDLTSVRNSRINQLVPDNPERFDWYPCVLGSEGFNSGTHCWDVEVKESFCWILGVTT
ASNQRKGRRCFNTDVWSVEYEQEGLSEPFGSRIKQKLDRVRVYLDYDRGTVSFSDPVTNT
HLHTFTTTFTHTLFPFFSCYPSLRILAFSSQ
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgtattcactatctgaagaagaactttcttgtcccatgtgctgtgaaatcttcaagaat
cctgttattttatcatgtagtcacagtgtctgtaaagagtgtcttcaacagttctggaga
accaagggaactcatgagtgtcctgtctgcaagagaatatcctcacatgctgaacctcca
tgtaatcttgcattaaaaaatgtgtgtgagtcgttcctgaaggagagaaatgaaaggcgt
tcatctgaggagatctgcagtttacacagtgagaaactcaaactcttctgtctggaggac
aaacagcctgcgtgtgtagtgtgctttacttcacaacaacacgacaatcataaattcaga
cccatcagtgaagtggcttcatcatataaggaggagatcaatacactgcttaaatcctta
caagagaaacttatacacaaagaaaaagttaaaggagtgtttgaaaaaacagttcatcac
atcaagtctcaagctgagcacacagagcgtcagattaaacagcagtttgacaagcttcat
cagtttctcagagatgaagaagaagctacaatcactgcactgagggaggaagaggagcag
aagaagcagatgatgaaggagaagctggaggagatgaacagacacatctcagctctttca
cacacaatcaaagacatggaggagatgatgaaagacaatgacgtctgctttctgaagaag
tttccagtctcaatggaaagagtcaagagctcacagccggatccacagatggcttctgga
gctttgattaatgtgccacgttacttgggcaacctgccgttcagagtctggaagaagatg
caggacatcgtccaaaacactcctttgattctggatccaaacacagctcatccagatctt
gtcctgtctgatgatctgaccagtgtgagaaacagcaggatcaatcaacttgttcctgat
aatccagagagattcgactggtatccctgtgttctgggttcagaggggtttaactcagga
acacactgctgggatgtggaggttaaagagagtttctgctggattcttggagtaactaca
gcatcaaaccaaaggaaggggcgtcgttgctttaacactgatgtctggagtgtggagtat
gaacaggaaggactgtctgaaccatttggctctcgtattaaacaaaagcttgatcgtgtt
agagtgtatctggactatgacagaggaacggtgtcattctctgatcctgtaactaacaca
catctacacacattcacaaccaccttcactcacacactctttccattctttagttgttat
ccctctctgaggatcttagcgttcagtagtcagtaa

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