Ctenopharyngodon idella (grass carp): 127509951
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Entry
127509951 CDS
T08802
Name
(RefSeq) zinc-binding protein A33-like
KO
K12012
tripartite motif-containing protein 35
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127509951
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127509951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
U-box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-Nse
zf-RING_10
Gp-FAR-1
DUF4200
Prok-RING_4
ECH_2
Apolipoprotein
EutA
zf-RING_6
PIN_8
Motif
Other DBs
NCBI-GeneID:
127509951
NCBI-ProteinID:
XP_051745320
LinkDB
All DBs
Position
3:complement(12110507..12115724)
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AA seq
451 aa
AA seq
DB search
MYSLSEEELSCPMCCEIFKNPVILSCSHSVCKECLQQFWRTKGTHECPVCKRISSHAEPP
CNLALKNVCESFLKERNERRSSEEICSLHSEKLKLFCLEDKQPACVVCFTSQQHDNHKFR
PISEVASSYKEEINTLLKSLQEKLIHKEKVKGVFEKTVHHIKSQAEHTERQIKQQFDKLH
QFLRDEEEATITALREEEEQKKQMMKEKLEEMNRHISALSHTIKDMEEMMKDNDVCFLKK
FPVSMERVKSSQPDPQMASGALINVPRYLGNLPFRVWKKMQDIVQNTPLILDPNTAHPDL
VLSDDLTSVRNSRINQLVPDNPERFDWYPCVLGSEGFNSGTHCWDVEVKESFCWILGVTT
ASNQRKGRRCFNTDVWSVEYEQEGLSEPFGSRIKQKLDRVRVYLDYDRGTVSFSDPVTNT
HLHTFTTTFTHTLFPFFSCYPSLRILAFSSQ
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtattcactatctgaagaagaactttcttgtcccatgtgctgtgaaatcttcaagaat
cctgttattttatcatgtagtcacagtgtctgtaaagagtgtcttcaacagttctggaga
accaagggaactcatgagtgtcctgtctgcaagagaatatcctcacatgctgaacctcca
tgtaatcttgcattaaaaaatgtgtgtgagtcgttcctgaaggagagaaatgaaaggcgt
tcatctgaggagatctgcagtttacacagtgagaaactcaaactcttctgtctggaggac
aaacagcctgcgtgtgtagtgtgctttacttcacaacaacacgacaatcataaattcaga
cccatcagtgaagtggcttcatcatataaggaggagatcaatacactgcttaaatcctta
caagagaaacttatacacaaagaaaaagttaaaggagtgtttgaaaaaacagttcatcac
atcaagtctcaagctgagcacacagagcgtcagattaaacagcagtttgacaagcttcat
cagtttctcagagatgaagaagaagctacaatcactgcactgagggaggaagaggagcag
aagaagcagatgatgaaggagaagctggaggagatgaacagacacatctcagctctttca
cacacaatcaaagacatggaggagatgatgaaagacaatgacgtctgctttctgaagaag
tttccagtctcaatggaaagagtcaagagctcacagccggatccacagatggcttctgga
gctttgattaatgtgccacgttacttgggcaacctgccgttcagagtctggaagaagatg
caggacatcgtccaaaacactcctttgattctggatccaaacacagctcatccagatctt
gtcctgtctgatgatctgaccagtgtgagaaacagcaggatcaatcaacttgttcctgat
aatccagagagattcgactggtatccctgtgttctgggttcagaggggtttaactcagga
acacactgctgggatgtggaggttaaagagagtttctgctggattcttggagtaactaca
gcatcaaaccaaaggaaggggcgtcgttgctttaacactgatgtctggagtgtggagtat
gaacaggaaggactgtctgaaccatttggctctcgtattaaacaaaagcttgatcgtgtt
agagtgtatctggactatgacagaggaacggtgtcattctctgatcctgtaactaacaca
catctacacacattcacaaccaccttcactcacacactctttccattctttagttgttat
ccctctctgaggatcttagcgttcagtagtcagtaa
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